RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 GM2AP17900 193 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 PTPN4P29074 926 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 SCNN1GP51170 649 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 BST2Q10589 180 aaKnown RBP10.99□□□□□ -0.65
CUX1-205ENST00000425244 TLDC1Q6P9B6 456 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 NDUFAF2Q8N183 169 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 EBNA1BP2Q99848 306 aaKnown RBP10.99□□□□□ -0.65
CUX1-205ENST00000425244 TMPRSS4Q9NRS4 437 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 CNTN3Q9P232 1028 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 MTO1Q9Y2Z2 717 aaKnown RBP10.99□□□□□ -0.65
CUX1-205ENST00000425244 RPS6KL1Q9Y6S9 549 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 ARL5CA6NH57 179 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 CASTOR2A6NHX0 329 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 SPTLC1O15269 473 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 KRT38O76015 456 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 PRKCHP24723 683 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 CDC25CP30307 473 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 BCAT1P54687 386 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 SESN2P58004 480 aaPredicted RBP10.99□□□□□ -0.65
CUX1-205ENST00000425244 MRPS5P82675 430 aaKnown RBP10.99□□□□□ -0.65
CUX1-205ENST00000425244 CDK16Q00536 496 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 CHI3L2Q15782 390 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 DPYSL2Q16555 572 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 CTC1Q2NKJ3 1217 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 ALKAL1Q6UXT8 129 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 ZNF534Q76KX8 674 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 ALYREFQ86V81 257 aaKnown RBP10.99□□□□□ -0.65
CUX1-205ENST00000425244 GSDMBQ8TAX9 411 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 MIPEPQ99797 713 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 KCNK13Q9HB14 408 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 PNPLA8Q9NP80 782 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 MIOSQ9NXC5 875 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 UBQLN1Q9UMX0 589 aaKnown RBP10.99□□□□□ -0.65
CUX1-205ENST00000425244 PLLPQ9Y342 182 aa10.99□□□□□ -0.65
CUX1-205ENST00000425244 MYO18AQ92614 2054 aaKnown RBP10.99□□□□□ -0.65
CUX1-205ENST00000425244 WDR27A2RRH5 827 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 PTGESO14684 152 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 RFPL1O75677 317 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 DLDP09622 509 aaKnown RBP10.98□□□□□ -0.65
CUX1-205ENST00000425244 ARL4AP40617 200 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 CPA2P48052 419 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 AP1B1Q10567 949 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 BST1Q10588 318 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 MDH1BQ5I0G3 518 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 ANKRD20A2Q5SQ80 823 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 ANKRD20A1Q5TYW2 823 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 RFWD3Q6PCD5 774 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 AGMOQ6ZNB7 445 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 LRRC8DQ7L1W4 858 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 SLC26A9Q7LBE3 791 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 NUDCD3Q8IVD9 361 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 ARID3BQ8IVW6 561 aaPredicted RBP10.98□□□□□ -0.65
CUX1-205ENST00000425244 ANKRD52Q8NB46 1076 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 HASPINQ8TF76 798 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 SIGLEC10Q96LC7 697 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 ZNF570Q96NI8 536 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 QKIQ96PU8 341 aaKnown RBP eCLIP10.98□□□□□ -0.656e-15■■■■□ 22.1
CUX1-205ENST00000425244 PAAF1Q9BRP4 392 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 DENND2DQ9H6A0 471 aaPredicted RBP10.98□□□□□ -0.65
CUX1-205ENST00000425244 RNPEPL1Q9HAU8 725 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 SAR1AQ9NR31 198 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 MTMR10Q9NXD2 777 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 DTLQ9NZJ0 730 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 TRDMT1O14717 391 aaKnown RBP10.98□□□□□ -0.65
CUX1-205ENST00000425244 GYG2O15488 501 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 PEX11AO75192 247 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 GCATO75600 419 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 WFS1O76024 890 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 VAV1P15498 845 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 ZFXP17010 805 aaPredicted RBP10.98□□□□□ -0.65
CUX1-205ENST00000425244 PAX7P23759 505 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 PTPN9P43378 593 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 SULT1E1P49888 294 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 SESN3P58005 492 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 ADIGQ0VDE8 80 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 DCAF6Q58WW2 860 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 NCBP2-AS2Q69YL0 99 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 ZCCHC23Q6ZST2 131 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 DEFB128Q7Z7B8 93 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 UNC93AQ86WB7 457 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 ZDHHC17Q8IUH5 632 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 FAM126BQ8IXS8 530 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 LRRC52Q8N7C0 313 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 CCNYQ8ND76 341 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 MCUQ8NE86 351 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 TFB1MQ8WVM0 346 aaKnown RBP10.98□□□□□ -0.65
CUX1-205ENST00000425244 KBTBD7Q8WVZ9 684 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 HTR3CQ8WXA8 447 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 E2F7Q96AV8 911 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 ETAA1Q9NY74 926 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.98□□□□□ -0.653e-6■■■■□ 19.4
CUX1-205ENST00000425244 OGDHLQ9ULD0 1010 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 ATP11BQ9Y2G3 1177 aa10.98□□□□□ -0.65
CUX1-205ENST00000425244 TET1Q8NFU7 2136 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 EIF4E1BA6NMX2 242 aaKnown RBP10.97□□□□□ -0.65
CUX1-205ENST00000425244 KPNA7A9QM74 516 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 FCHO1O14526 889 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 CREB3O43889 395 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 CCDC22O60826 627 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 ACAT1P24752 427 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms