RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 GPC3P51654 580 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 PRKG1Q13976 671 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 Q3C1V9 767 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 CEP55Q53EZ4 464 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 SH3PXD2AQ5TCZ1 1133 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 NXNQ6DKJ4 435 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 DSELQ8IZU8 1212 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 NPAS2Q99743 824 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 STRA6Q9BX79 667 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 SLC4A5Q9BY07 1137 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 UNKQ9C0B0 810 aaKnown RBP11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 SOX17Q9H6I2 414 aaPredicted RBP11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 TMEM206Q9H813 350 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 OLAHQ9NV23 265 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 PARVAQ9NVD7 372 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 PTPRJQ12913 1337 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 FAM149AA5PLN7 773 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 HNRNPDLO14979 420 aaKnown RBP11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 RAD17O75943 681 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 H6PDO95479 791 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 ZNF23P17027 643 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 MX2P20592 715 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 HOXD11P31277 338 aaPredicted RBP11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 QARSP47897 775 aaKnown RBP11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 BMXP51813 675 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 TRAF2Q12933 501 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 KLF10Q13118 480 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 NEDD8Q15843 81 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 DOK7Q18PE1 504 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 DNAJC24Q6P3W2 148 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 DPH6Q7L8W6 267 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 MIER3Q7Z3K6 550 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 JOSD2Q8TAC2 188 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 SORT1Q99523 831 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 APOBEC3GQ9HC16 384 aaKnown RBP11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 ADA2Q9NZK5 511 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 SEL1LQ9UBV2 794 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 DRG1Q9Y295 367 aaKnown RBP11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 ZHX2Q9Y6X8 837 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 H7C0C1 242 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 TCEA1P23193 301 aaKnown RBP11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 EPHX2P34913 555 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 ATP5OP48047 213 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 GABPAQ06546 454 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 RALGDSQ12967 914 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 AP3B2Q13367 1082 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 ZNF423Q2M1K9 1284 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 MGAT5BQ3V5L5 792 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 MBLAC2Q68D91 279 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 SETD3Q86TU7 594 aaPredicted RBP11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 SLC15A4Q8N697 577 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 KCTD6Q8NC69 237 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 HPS1Q92902 700 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 NKD2Q969F2 451 aaPredicted RBP11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 VTI1AQ96AJ9 217 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 RMND5BQ96G75 393 aaPredicted RBP11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 KCNK16Q96T55 309 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 HERC2P3Q9BVR0 1158 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 NRDE2Q9H7Z3 1164 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 C6orf203Q9P0P8 240 aaPredicted RBP11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 IP6K2Q9UHH9 426 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 FIS1Q9Y3D6 152 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 HES2Q9Y543 173 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 LRRC37AA6NMS7 1700 aa11.59□□□□□ -0.55
SEC61A1-202ENST00000424880 IGKV6D-41A0A0C4DH26 115 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 TMEM191CA6NGB0 347 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 TMEM191BP0C7N4 346 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 HDCP19113 662 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 NEK2P51955 445 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 YWHAZP63104 245 aaKnown RBP11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 NR1D2Q14995 579 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 TBCCQ15814 346 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 LAYNQ6UX15 382 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 SCARA5Q6ZMJ2 495 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 GPR141Q7Z602 305 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 CMC1Q7Z7K0 106 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 OFCC1Q8IZS5 231 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 ARFGAP1Q8N6T3 406 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 GCOM2Q9BZD3 368 aaPredicted RBP11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 WDR11Q9BZH6 1224 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 TUFT1Q9NNX1 390 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 FETUBQ9UGM5 382 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 POU2F3Q9UKI9 436 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 ITGA11Q9UKX5 1188 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 EMCNQ9ULC0 261 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 NRXN2Q9P2S2 1712 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 TPP1O14773 563 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 NPR1P16066 1061 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 ZNF26P17031 533 aaPredicted RBP11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 PSMA2P25787 234 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 NOVP48745 357 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 UGCGQ16739 394 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 CDO1Q16878 200 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 PITRM1Q5JRX3 1037 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 AARS2Q5JTZ9 985 aaKnown RBP11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 ZBTB41Q5SVQ8 909 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 IL31Q6EBC2 164 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 SLC39A4Q6P5W5 647 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 PCGF5Q86SE9 256 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 ABRAQ8N0Z2 381 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms