RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 HTR3CQ8WXA8 447 aa7.63□□□□□ -1.19
BDNF-209ENST00000420794 EXOC4Q96A65 974 aa7.63□□□□□ -1.19
BDNF-209ENST00000420794 IFT43Q96FT9 208 aa7.63□□□□□ -1.19
BDNF-209ENST00000420794 THG1LQ9NWX6 298 aaKnown RBP7.63□□□□□ -1.19
BDNF-209ENST00000420794 POLR3GO15318 223 aaPredicted RBP7.63□□□□□ -1.19
BDNF-209ENST00000420794 RGS16O15492 202 aaPredicted RBP7.63□□□□□ -1.19
BDNF-209ENST00000420794 ITGAVP06756 1048 aa7.63□□□□□ -1.19
BDNF-209ENST00000420794 IGFBP4P22692 258 aa7.63□□□□□ -1.19
BDNF-209ENST00000420794 IFNAR2P48551 515 aa7.63□□□□□ -1.19
BDNF-209ENST00000420794 ITGA8P53708 1063 aa7.63□□□□□ -1.19
BDNF-209ENST00000420794 ATXN1P54253 815 aaKnown RBP7.63□□□□□ -1.19
BDNF-209ENST00000420794 PMS2P54278 862 aa7.63□□□□□ -1.19
BDNF-209ENST00000420794 XRCC4Q13426 336 aa7.63□□□□□ -1.19
BDNF-209ENST00000420794 SLC45A4Q5BKX6 768 aa7.63□□□□□ -1.19
BDNF-209ENST00000420794 VSIG1Q86XK7 387 aa7.63□□□□□ -1.19
BDNF-209ENST00000420794 CARNMT1Q8N4J0 409 aa7.63□□□□□ -1.19
BDNF-209ENST00000420794 UHMK1Q8TAS1 419 aaKnown RBP7.63□□□□□ -1.19
BDNF-209ENST00000420794 USP33Q8TEY7 942 aa7.63□□□□□ -1.19
BDNF-209ENST00000420794 PLD4Q96BZ4 506 aa7.63□□□□□ -1.19
BDNF-209ENST00000420794 MRRFQ96E11 262 aaKnown RBP7.63□□□□□ -1.19
BDNF-209ENST00000420794 CELF6Q96J87 481 aaKnown RBP7.63□□□□□ -1.19
BDNF-209ENST00000420794 KCTD15Q96SI1 283 aaPredicted RBP7.63□□□□□ -1.19
BDNF-209ENST00000420794 CLSTN3Q9BQT9 956 aa7.63□□□□□ -1.19
BDNF-209ENST00000420794 DNAJC17Q9NVM6 304 aaKnown RBP7.63□□□□□ -1.19
BDNF-209ENST00000420794 CXXC1Q9P0U4 656 aaPredicted RBP7.63□□□□□ -1.19
BDNF-209ENST00000420794 NEU2Q9Y3R4 380 aa7.63□□□□□ -1.19
BDNF-209ENST00000420794 FARP1Q9Y4F1 1045 aaPredicted RBP7.63□□□□□ -1.19
BDNF-209ENST00000420794 OPHN1O60890 802 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 ANXA9O76027 345 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 XPAP23025 273 aaPredicted RBP7.62□□□□□ -1.19
BDNF-209ENST00000420794 GGCXP38435 758 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 CXCR3P49682 368 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 RENBPP51606 427 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 PDIA2Q13087 525 aaKnown RBP7.62□□□□□ -1.19
BDNF-209ENST00000420794 POLD3Q15054 466 aaPredicted RBP7.62□□□□□ -1.19
BDNF-209ENST00000420794 RAB41Q5JT25 222 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 ZNF697Q5TEC3 545 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 LIMS2Q7Z4I7 341 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 TMEM173Q86WV6 379 aaPredicted RBP7.62□□□□□ -1.19
BDNF-209ENST00000420794 GSPT2Q8IYD1 628 aaKnown RBP7.62□□□□□ -1.19
BDNF-209ENST00000420794 CASP10Q92851 521 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 BHMTQ93088 406 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 KLHL5Q96PQ7 755 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 RTP3Q9BQQ7 232 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 CWC15Q9P013 229 aaKnown RBP7.62□□□□□ -1.19
BDNF-209ENST00000420794 SAE1Q9UBE0 346 aaPredicted RBP7.62□□□□□ -1.19
BDNF-209ENST00000420794 TRHDEQ9UKU6 1024 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 PCDHA11Q9Y5I1 949 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 ACSL4O60488 711 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 TSPAN3O60637 253 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 KRT15P19012 456 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 IGFBP6P24592 240 aaPredicted RBP7.62□□□□□ -1.19
BDNF-209ENST00000420794 PTPN7P35236 360 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 MAGEA10P43363 369 aaPredicted RBP7.62□□□□□ -1.19
BDNF-209ENST00000420794 MORF4L2Q15014 288 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 ACCSLQ4AC99 568 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 CCDC13Q8IYE1 715 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 PLD5Q8N7P1 536 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 HNRNPLLQ8WVV9 542 aaKnown RBP7.62□□□□□ -1.19
BDNF-209ENST00000420794 CASKIN2Q8WXE0 1202 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 AGAP3Q96P47 875 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 RBM15Q96T37 977 aaKnown RBP eCLIP7.62□□□□□ -1.19
BDNF-209ENST00000420794 OSBPL2Q9H1P3 480 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 MED4Q9NPJ6 270 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 MAN1C1Q9NR34 630 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.62□□□□□ -1.19
BDNF-209ENST00000420794 XPO7Q9UIA9 1087 aaKnown RBP7.62□□□□□ -1.19
BDNF-209ENST00000420794 PFDN6O15212 129 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 BNIP3LO60238 219 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 LRIG2O94898 1065 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 JCHAINP01591 159 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 CD48P09326 243 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 RBL1P28749 1068 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 CORO1AP31146 461 aaKnown RBP7.62□□□□□ -1.19
BDNF-209ENST00000420794 GEMIN4P57678 1058 aaKnown RBP7.62□□□□□ -1.19
BDNF-209ENST00000420794 ST8SIA6P61647 398 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 PTK6Q13882 451 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 MRPL58Q14197 206 aaKnown RBP7.62□□□□□ -1.19
BDNF-209ENST00000420794 NOMO1Q15155 1222 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 MARC1Q5VT66 337 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 CCDC33Q8N5R6 958 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 ARL14EPQ8N8R7 260 aaPredicted RBP7.62□□□□□ -1.19
BDNF-209ENST00000420794 EIF1ADQ8N9N8 165 aaKnown RBP7.62□□□□□ -1.19
BDNF-209ENST00000420794 LRRN4CLQ8ND94 238 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 NKD2Q969F2 451 aaPredicted RBP7.62□□□□□ -1.19
BDNF-209ENST00000420794 PNKPQ96T60 521 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 ANKZF1Q9H8Y5 726 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 VPS28Q9UK41 221 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 AAR2Q9Y312 384 aaKnown RBP7.62□□□□□ -1.19
BDNF-209ENST00000420794 USP3Q9Y6I4 520 aa7.62□□□□□ -1.19
BDNF-209ENST00000420794 ACSL3O95573 720 aa7.61□□□□□ -1.19
BDNF-209ENST00000420794 TBX18O95935 607 aa7.61□□□□□ -1.19
BDNF-209ENST00000420794 HNRNPA1P09651 372 aaKnown RBP eCLIP7.61□□□□□ -1.19
BDNF-209ENST00000420794 RHOQP17081 205 aa7.61□□□□□ -1.19
BDNF-209ENST00000420794 DDX6P26196 483 aaKnown RBP eCLIP7.61□□□□□ -1.19
BDNF-209ENST00000420794 HCAR3P49019 387 aa7.61□□□□□ -1.19
BDNF-209ENST00000420794 MNX1P50219 401 aaPredicted RBP7.61□□□□□ -1.19
BDNF-209ENST00000420794 ZRSR2Q15696 482 aaKnown RBP7.61□□□□□ -1.19
BDNF-209ENST00000420794 TXNRD3NBQ6F5E7 133 aa7.61□□□□□ -1.19
BDNF-209ENST00000420794 NAPEPLDQ6IQ20 393 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms