RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 SERPINA4P29622 427 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 MGAT5Q09328 741 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 GRIK3Q13003 919 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 CDC16Q13042 620 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 MPP3Q13368 585 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 DCLRE1AQ6PJP8 1040 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 SLC22A9Q8IVM8 553 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 SCUBE3Q8IX30 993 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 CLEC4FQ8N1N0 589 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 OR2W6PQ8NHA6 318 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 B4GALNT2Q8NHY0 566 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 KAT2BQ92831 832 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 APOL2Q9BQE5 337 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 PCDH9Q9HC56 1237 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 CAPN10Q9HC96 672 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 AVENQ9NQS1 362 aaPredicted RBP8.65□□□□□ -1.02
UBR4-206ENST00000419533 LY75O60449 1722 aa8.65□□□□□ -1.03
UBR4-206ENST00000419533 C16orf96A6NNT2 1141 aa8.65□□□□□ -1.03
UBR4-206ENST00000419533 CDH8P55286 799 aa8.65□□□□□ -1.03
UBR4-206ENST00000419533 ARMC12Q5T9G4 340 aa8.65□□□□□ -1.03
UBR4-206ENST00000419533 WSCD1Q658N2 575 aa8.65□□□□□ -1.03
UBR4-206ENST00000419533 HTR3CQ8WXA8 447 aa8.65□□□□□ -1.03
UBR4-206ENST00000419533 SLC35C1Q96A29 364 aa8.65□□□□□ -1.03
UBR4-206ENST00000419533 IL17RAQ96F46 866 aa8.65□□□□□ -1.03
UBR4-206ENST00000419533 ZBED3Q96IU2 234 aaPredicted RBP8.65□□□□□ -1.03
UBR4-206ENST00000419533 ECSITQ9BQ95 431 aa8.65□□□□□ -1.03
UBR4-206ENST00000419533 C2orf49Q9BVC5 232 aaPredicted RBP8.65□□□□□ -1.03
UBR4-206ENST00000419533 ULBP1Q9BZM6 244 aa8.65□□□□□ -1.03
UBR4-206ENST00000419533 BTBD7Q9P203 1132 aa8.65□□□□□ -1.03
UBR4-206ENST00000419533 MGAT4DA6NG13 374 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 MEIS2O14770 477 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 SPTLC1O15269 473 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 FGF19O95750 216 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 PCNAP12004 261 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 ZBTB17Q13105 803 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 EARS2Q5JPH6 523 aaKnown RBP8.64□□□□□ -1.03
UBR4-206ENST00000419533 USP45Q70EL2 814 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 RD3Q7Z3Z2 195 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 PTAR1Q7Z6K3 402 aaPredicted RBP8.64□□□□□ -1.03
UBR4-206ENST00000419533 SLC26A11Q86WA9 606 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 KIAA0319LQ8IZA0 1049 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 CASP10Q92851 521 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 TKTL2Q9H0I9 626 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 PABPC3Q9H361 631 aaKnown RBP8.64□□□□□ -1.03
UBR4-206ENST00000419533 BLOC1S4Q9NUP1 217 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 APPL1Q9UKG1 709 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 PAPPAQ13219 1627 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 KPNA3O00505 521 aaPredicted RBP8.64□□□□□ -1.03
UBR4-206ENST00000419533 NDUFS2O75306 463 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 BMP10O95393 424 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 MPOP05164 745 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 TPBGLP0DKB5 382 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 NOS2P35228 1153 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 CHKAP35790 457 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 GTF2BQ00403 316 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 FBXL19Q6PCT2 694 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 PHF21AQ96BD5 680 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 AHCYL2Q96HN2 611 aaKnown RBP8.64□□□□□ -1.03
UBR4-206ENST00000419533 CACNA2D2Q9NY47 1150 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 FAM153AQ9UHL3 310 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 ST3GAL5Q9UNP4 418 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 SLCO1B7G3V0H7 640 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 KRT20P35900 424 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 LRRC8BQ6P9F7 803 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 C16orf59Q7L2K0 433 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 ACTL9Q8TC94 416 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 SERAC1Q96JX3 654 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 PANX3Q96QZ0 392 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 ACO2Q99798 780 aaKnown RBP8.64□□□□□ -1.03
UBR4-206ENST00000419533 ELOVL6Q9H5J4 265 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 OSGEPQ9NPF4 335 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 C2CD2Q9Y426 696 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 HPGDP15428 266 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 NPR3P17342 541 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 CD52P31358 61 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 MAPK8P45983 427 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 CD151P48509 253 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 ITGA7Q13683 1181 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 NBPF20Q3BBV1 942 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 CBWD3Q5JTY5 395 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 CBWD5Q5RIA9 395 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 GLT6D1Q7Z4J2 308 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 METTL3Q86U44 580 aaKnown RBP8.64□□□□□ -1.03
UBR4-206ENST00000419533 WNT8BQ93098 351 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 FAM111AQ96PZ2 611 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 TBL1YQ9BQ87 522 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 CORO1BQ9BR76 489 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 STK39Q9UEW8 545 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 BLOC1S6Q9UL45 172 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 MYH14Q7Z406 1995 aaKnown RBP8.64□□□□□ -1.03
UBR4-206ENST00000419533 SMIM35A0A1B0GVV1 85 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 ITGBL1O95965 494 aaPredicted RBP8.64□□□□□ -1.03
UBR4-206ENST00000419533 FGFR1P11362 822 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 PSMA3P25788 255 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 MMP13P45452 471 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 MAPK9P45984 424 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 SKP1P63208 163 aa8.64□□□□□ -1.03
UBR4-206ENST00000419533 SETMARQ53H47 684 aaPredicted RBP8.64□□□□□ -1.03
UBR4-206ENST00000419533 RBM43Q6ZSC3 357 aaKnown RBP8.64□□□□□ -1.03
UBR4-206ENST00000419533 TPGS1Q6ZTW0 290 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms