RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 ATL2Q8NHH9 583 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 SLC35B2Q8TB61 432 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 GPR152Q8TDT2 470 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 POF1BQ8WVV4 589 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 HNRNPLLQ8WVV9 542 aaKnown RBP6.16□□□□□ -1.42
HMGB3-202ENST00000419110 CASKIN2Q8WXE0 1202 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 IFT81Q8WYA0 676 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 MRPS31Q92665 395 aaKnown RBP6.16□□□□□ -1.42
HMGB3-202ENST00000419110 CASP10Q92851 521 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 PPP2R3CQ969Q6 453 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 PSMG2Q969U7 264 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 LRRC45Q96CN5 670 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 BTN2A3PQ96KV6 586 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 HAPLN3Q96S86 360 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 FAM118BQ9BPY3 351 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 ERP44Q9BS26 406 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 C17orf80Q9BSJ5 609 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 TKTL2Q9H0I9 626 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 RAB6CQ9H0N0 254 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 LMAN2LQ9H0V9 348 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 EPC1Q9H2F5 836 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 PLEKHA4Q9H4M7 779 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 CATSPERBQ9H7T0 1116 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 EPB41L5Q9HCM4 733 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 GDF3Q9NR23 364 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 ASAH2Q9NR71 780 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 ARHGEF38Q9NXL2 777 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 DMGDHQ9UI17 866 aaKnown RBP6.16□□□□□ -1.42
HMGB3-202ENST00000419110 MSRAQ9UJ68 235 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 DNMT3LQ9UJW3 386 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 DNPEPQ9ULA0 475 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 SHOC2Q9UQ13 582 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 NR2E1Q9Y466 385 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 HEY1Q9Y5J3 304 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 IRAK3Q9Y616 596 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 NOTCH4Q99466 2003 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 MYO9BQ13459 2157 aa6.16□□□□□ -1.42
HMGB3-202ENST00000419110 COL4A3Q01955 1670 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 SLC12A8A0AV02 714 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 TYW5A2RUC4 315 aaKnown RBP6.15□□□□□ -1.42
HMGB3-202ENST00000419110 F5H5T6 163 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 NCAM2O15394 837 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 TGM5O43548 720 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 XYLBO75191 536 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 PAGE1O75459 146 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 ZMYND10O75800 440 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 LRIG2O94898 1065 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 SEC31AO94979 1220 aaKnown RBP6.15□□□□□ -1.42
HMGB3-202ENST00000419110 SEC24AO95486 1093 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 CXCL14O95715 111 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 C1RP00736 705 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 IFNB1P01574 187 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 KRT14P02533 472 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 CKMP06732 381 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 MX2P20592 715 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 EPHB2P29323 1055 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 HOXA9P31269 272 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 HOXC13P31276 330 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 PTGIRP43119 386 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 KCNJ1P48048 391 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 HCAR3P49019 387 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 SLC11A2P49281 568 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 HARS2P49590 506 aaKnown RBP6.15□□□□□ -1.42
HMGB3-202ENST00000419110 NRG1Q02297 640 aaPredicted RBP6.15□□□□□ -1.42
HMGB3-202ENST00000419110 SEMA3BQ13214 749 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 GPS2Q13227 327 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 XRCC4Q13426 336 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 PDK1Q15118 436 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 SLC45A4Q5BKX6 768 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 PPM1LQ5SGD2 360 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 C9orf50Q5SZB4 431 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 IZUMO3Q5VZ72 239 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 DUPD1Q68J44 220 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 RWDD4Q6NW29 188 aaKnown RBP6.15□□□□□ -1.42
HMGB3-202ENST00000419110 DARS2Q6PI48 645 aaKnown RBP6.15□□□□□ -1.42
HMGB3-202ENST00000419110 LRRC31Q6UY01 552 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 ANKS1BQ7Z6G8 1248 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 UNC45BQ8IWX7 931 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 PYROXD2Q8N2H3 581 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 ZNF276Q8N554 614 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 PQLC3Q8N755 202 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 KREMEN2Q8NCW0 462 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 PCDH19Q8TAB3 1148 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 AENQ8WTP8 325 aaKnown RBP6.15□□□□□ -1.42
HMGB3-202ENST00000419110 HDAC7Q8WUI4 952 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 TFB1MQ8WVM0 346 aaKnown RBP6.15□□□□□ -1.42
HMGB3-202ENST00000419110 SEC14L1Q92503 715 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 CAVIN3Q969G5 261 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 FCRL2Q96LA5 508 aaPredicted RBP6.15□□□□□ -1.42
HMGB3-202ENST00000419110 MYRFLQ96LU7 910 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 OLFM3Q96PB7 478 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 KLHL5Q96PQ7 755 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 DDX50Q9BQ39 737 aaKnown RBP6.15□□□□□ -1.42
HMGB3-202ENST00000419110 KLC2Q9H0B6 622 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 TSPYL1Q9H0U9 437 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 OSBPL2Q9H1P3 480 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 CCSER2Q9H7U1 834 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 TRPC7Q9HCX4 862 aa6.15□□□□□ -1.42
HMGB3-202ENST00000419110 ALG13Q9NP73 1137 aaKnown RBP6.15□□□□□ -1.42
HMGB3-202ENST00000419110 MAN1C1Q9NR34 630 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms