RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 PCDHB7Q9Y5E2 793 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 PCDHB5Q9Y5E4 795 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 PLXNA4Q9HCM2 1894 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 SYNJ2BP-COX16A0A087WUM0 186 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 FAM47DPA6NHR8 397 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 WASH4PA8MWX3 477 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 KCNU1A8MYU2 1149 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 EBAG9O00559 213 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 FGF10O15520 208 aaPredicted RBP9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 CREB3O43889 395 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 LRIG2O94898 1065 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 SUN1O94901 812 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 APRTP07741 180 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 BRAFP15056 766 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 CREB1P16220 341 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 PTPN3P26045 913 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 GRIK1P39086 918 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 CCT5P48643 541 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 SLC11A1P49279 550 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 MNX1P50219 401 aaPredicted RBP9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 SKIDA1Q1XH10 827 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 PARP6Q2NL67 630 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 FAXCQ5TGI0 409 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 FUT10Q6P4F1 479 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 LRRC8BQ6P9F7 803 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 ZNF449Q6P9G9 518 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 C6orf89Q6UWU4 347 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 RGS9BPQ6ZS82 235 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 MON1AQ86VX9 555 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 PALM2Q8IXS6 379 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 ZNF567Q8N184 647 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 NUP93Q8N1F7 819 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 NPWQ8N729 165 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 ZSCAN18Q8TBC5 510 aaPredicted RBP9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 ADAM32Q8TC27 787 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 SPPL2BQ8TCT7 592 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 SH3TC2Q8TF17 1288 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 C2orf15Q8WU43 125 aaKnown RBP9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 CKAP2Q8WWK9 683 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 SLC39A13Q96H72 371 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 SPATA17Q96L03 361 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 TOX2Q96NM4 488 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 TSGA13Q96PP4 275 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 VAT1Q99536 393 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 EBNA1BP2Q99848 306 aaKnown RBP9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 TKTL2Q9H0I9 626 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 TRABDQ9H4I3 376 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 FBXO44Q9H4M3 255 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 COX16Q9P0S2 106 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 OR12D3Q9UGF7 316 aa9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 SMG5Q9UPR3 1016 aaKnown RBP9.32□□□□□ -0.92
LINCMD1-201ENST00000418518 PCNTO95613 3336 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 FAM159BA6NKW6 160 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 ERI2A8K979 691 aaKnown RBP9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 POC1B-GALNT4F8VUJ3 575 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 H7C4K7 107 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 TYROBPO43914 113 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 CACNG3O60359 315 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 TADA2AO75478 443 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 RTN3O95197 1032 aaPredicted RBP9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 VNN2O95498 520 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 ASMTLO95671 621 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 APOEP02649 317 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 GALTP07902 379 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 OR4Q2P0C623 313 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 IBSPP21815 317 aaPredicted RBP9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 CCR1P32246 355 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 GARSP41250 739 aaKnown RBP9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 PSEN1P49768 467 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 GATMP50440 423 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 SARNPP82979 210 aaKnown RBP9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 COG7P83436 770 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 GPR17Q13304 367 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 NAB1Q13506 487 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 FRG1Q14331 258 aaKnown RBP9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 EFTUD2Q15029 972 aaKnown RBP eCLIP9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 PKN2Q16513 984 aaKnown RBP9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 CTXN3Q4LDR2 81 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 HP1BP3Q5SSJ5 553 aaPredicted RBP9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 FAM171A1Q5VUB5 890 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 BTBD8Q5XKL5 378 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 AFMIDQ63HM1 303 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 DENND5BQ6ZUT9 1274 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 YTHDF3Q7Z739 585 aaKnown RBP9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 PIGWQ7Z7B1 504 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 CCNJLQ8IV13 435 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 ARHGAP12Q8IWW6 846 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 SRRM1Q8IYB3 904 aaKnown RBP9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 RNF168Q8IYW5 571 aaPredicted RBP9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 ABI1Q8IZP0 508 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 LRRC43Q8N309 656 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 ZNF276Q8N554 614 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 TAB3Q8N5C8 712 aaPredicted RBP9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 LZTR1Q8N653 840 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 COLGALT1Q8NBJ5 622 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 GSDMBQ8TAX9 411 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 CASP10Q92851 521 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 FATE1Q969F0 183 aa9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 ALKBH8Q96BT7 664 aaKnown RBP9.31□□□□□ -0.92
LINCMD1-201ENST00000418518 MAGEB18Q96M61 343 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms