RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 SMIM31A0A1B0GVY4 71 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 DDTLA6NHG4 134 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-205ENST00000418258 DLGAP3O95886 979 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 VIL1P09327 827 aaKnown RBP11.46□□□□□ -0.57
PTCH1-205ENST00000418258 HOXC6P09630 235 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 VAC14Q08AM6 782 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 ARMC12Q5T9G4 340 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 USP50Q70EL3 339 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-205ENST00000418258 TRAPPC12Q8WVT3 735 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 FAM50BQ9Y247 325 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 UBTFL6P0CB48 400 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-205ENST00000418258 TALDO1P37837 337 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 RAB14P61106 215 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 C11orf88Q6PI97 169 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 MOXD1Q6UVY6 613 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 CCDC149Q6ZUS6 474 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 ZNF655Q8N720 491 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-205ENST00000418258 SPPL2AQ8TCT8 520 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 ERGIC2Q96RQ1 377 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 S100A13Q99584 98 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 SPRTNQ9H040 489 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-205ENST00000418258 TAS2R13Q9NYV9 303 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 INO80Q9ULG1 1556 aaPredicted RBP11.46□□□□□ -0.58
PTCH1-205ENST00000418258 LACTBL1A8MY62 500 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 MPOP05164 745 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 UQCRBP14927 111 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 TPH1P17752 444 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 NDUFV1P49821 464 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 OLFML2BQ68BL8 750 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 ZSWIM2Q8NEG5 633 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 TAS1R2Q8TE23 839 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 AVENQ9NQS1 362 aaPredicted RBP11.46□□□□□ -0.58
PTCH1-205ENST00000418258 PHTF1Q9UMS5 762 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 TNFSF13BQ9Y275 285 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 WNT10BO00744 389 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 SLC9A3R1O14745 358 aaPredicted RBP11.46□□□□□ -0.58
PTCH1-205ENST00000418258 HIST1H2ABP04908 130 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 HSD17B3P37058 310 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 HIST3H2AQ7L7L0 130 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 C19orf18Q8NEA5 215 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 EPS8L3Q8TE67 593 aaKnown RBP11.46□□□□□ -0.58
PTCH1-205ENST00000418258 HIST1H2ACQ93077 130 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 MRPS26Q9BYN8 205 aaKnown RBP11.46□□□□□ -0.58
PTCH1-205ENST00000418258 DPY30Q9C005 99 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 VIPAS39Q9H9C1 493 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 ASAH2Q9NR71 780 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 TAF6LQ9Y6J9 622 aa11.46□□□□□ -0.58
PTCH1-205ENST00000418258 ABCA9Q8IUA7 1624 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 IFNA16P05015 189 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 DSG1Q02413 1049 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 PANX3Q96QZ0 392 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 RTFDC1Q9BY42 306 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-205ENST00000418258 DCLK3Q9C098 648 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 PIH1D1Q9NWS0 290 aaKnown RBP11.45□□□□□ -0.58
PTCH1-205ENST00000418258 SNX13Q9Y5W8 968 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 CCDC154A6NI56 674 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 OPLAHO14841 1288 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 KLHL41O60662 606 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 MSCO60682 206 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 HSPA13P48723 471 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 DDR2Q16832 855 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 AGKQ53H12 422 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 SNX30Q5VWJ9 437 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 ZDHHC17Q8IUH5 632 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 FHDC1Q9C0D6 1143 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-205ENST00000418258 HDHD2Q9H0R4 259 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 IL1RAPL1Q9NZN1 696 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 UBA2Q9UBT2 640 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-205ENST00000418258 MRPS23Q9Y3D9 190 aaKnown RBP11.45□□□□□ -0.58
PTCH1-205ENST00000418258 KANSL1LA0AUZ9 987 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 SEC22BO75396 215 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 C21orf59P57076 290 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 MAD2L1Q13257 205 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-205ENST00000418258 BIKQ13323 160 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 SPIDRQ14159 915 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 ALG11Q2TAA5 492 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 AGMOQ6ZNB7 445 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 KCNMB4Q86W47 210 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 FBXO39Q8N4B4 442 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 TC2NQ8N9U0 490 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 SPATA20Q8TB22 786 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 SLC2A14Q8TDB8 520 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 FIG4Q92562 907 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 TKTL2Q9H0I9 626 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 ADAM30Q9UKF2 790 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 FZD1Q9UP38 647 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 CRYL1Q9Y2S2 319 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 CITO14578 2027 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 TLL1O43897 1013 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 SARSP49591 514 aaKnown RBP11.45□□□□□ -0.58
PTCH1-205ENST00000418258 RNFT2Q96EX2 444 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 EHD4Q9H223 541 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 TRIT1Q9H3H1 467 aaKnown RBP11.45□□□□□ -0.58
PTCH1-205ENST00000418258 F8VZ95 297 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 CNOT3O75175 753 aaKnown RBP11.45□□□□□ -0.58
PTCH1-205ENST00000418258 FAM228BP0C875 321 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 PAICSP22234 425 aaKnown RBP11.45□□□□□ -0.58
PTCH1-205ENST00000418258 SERPINA4P29622 427 aa11.45□□□□□ -0.58
PTCH1-205ENST00000418258 ATP5C1P36542 298 aaKnown RBP11.45□□□□□ -0.58
PTCH1-205ENST00000418258 IQSEC1Q6DN90 963 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms