RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 ACSS2Q9NR19 701 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 ZNHIT2Q9UHR6 403 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 MRPL11Q9Y3B7 192 aaKnown RBP15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 HNRNPDLO14979 420 aaKnown RBP15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 RNASEH2AO75792 299 aaKnown RBP15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 HLA-DRAP01903 254 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 CPA3P15088 417 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 UGT1A6P19224 532 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 UGT1A1P22309 533 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 UGT1A4P22310 534 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 PSMA2P25787 234 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 UGT1A3P35503 534 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 UGT1A5P35504 534 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 ZNF280AP59817 542 aaPredicted RBP15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 YWHAZP63104 245 aaKnown RBP15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 CYP24A1Q07973 514 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 ZNF423Q2M1K9 1284 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 FKBP1CQ5VVH2 108 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 ARCQ7LC44 396 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 USP37Q86T82 979 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 KCTD6Q8NC69 237 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 BORCS5Q969J3 196 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 IGSF9Q9P2J2 1179 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 FEM1BQ9UK73 627 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 FAM32AQ9Y421 112 aaKnown RBP15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 A0A1W2PPW3 197 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 FZD9O00144 591 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 AMHP03971 560 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 FGF3P11487 239 aaPredicted RBP15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 CRHR1P34998 444 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 BNIP3Q12983 259 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 FSCBQ5H9T9 825 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 EGFLAMQ63HQ2 1017 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 MBLAC2Q68D91 279 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 MOB2Q70IA6 237 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 HOMEZQ8IX15 550 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 KBTBD7Q8WVZ9 684 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 ATP6V1E2Q96A05 226 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 TMA16Q96EY4 203 aaKnown RBP15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 DDX56Q9NY93 547 aaKnown RBP15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 F5H423 210 aaPredicted RBP15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 CSDE1O75534 798 aaKnown RBP15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 CCDC130P13994 396 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 GTF2BQ00403 316 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 C1QBPQ07021 282 aaKnown RBP15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 GPR107Q5VW38 600 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 NANOGP8Q6NSW7 305 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 DSELQ8IZU8 1212 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 ZNF786Q8N393 782 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 PDCD6IPQ8WUM4 868 aaKnown RBP15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 TAAR1Q96RJ0 339 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 TBX20Q9UMR3 447 aa15.09■□□□□ 0.01
NCKIPSD-204ENST00000416649 TESPA1A2RU30 521 aaPredicted RBP15.08■□□□□ 0
NCKIPSD-204ENST00000416649 PLOD2O00469 737 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 WDR46O15213 610 aaKnown RBP15.08■□□□□ 0
NCKIPSD-204ENST00000416649 SPAG6O75602 509 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 ATE1O95260 518 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 ALDH2P05091 517 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 OSBPP22059 807 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 IL1R2P27930 398 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 ETFBP38117 255 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 RARRES1P49788 294 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 CDK18Q07002 472 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 TAF5Q15542 800 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 SLC9B1Q4ZJI4 515 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 PHF13Q86YI8 300 aaPredicted RBP15.08■□□□□ 0
NCKIPSD-204ENST00000416649 IFNLR1Q8IU57 520 aaPredicted RBP15.08■□□□□ 0
NCKIPSD-204ENST00000416649 UNC5BQ8IZJ1 945 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 FAM47BQ8NA70 645 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 KYQ8NBH2 561 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 ZNF516Q92618 1163 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 RCN3Q96D15 328 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 KLHL32Q96NJ5 620 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 SLC4A5Q9BY07 1137 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 COG4Q9H9E3 785 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 SNX13Q9Y5W8 968 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 GPC6Q9Y625 555 aaPredicted RBP15.08■□□□□ 0
NCKIPSD-204ENST00000416649 POLR2AP24928 1970 aaKnown RBP15.08■□□□□ 0
NCKIPSD-204ENST00000416649 PMM2O15305 246 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 ITGB5P18084 799 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 ACAT1P24752 427 aaKnown RBP15.08■□□□□ 0
NCKIPSD-204ENST00000416649 ARRB2P32121 409 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 CA8P35219 290 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 ALDH3B2P48448 385 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 RPS6P62753 249 aaKnown RBP15.08■□□□□ 0
NCKIPSD-204ENST00000416649 USP41Q3LFD5 358 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 IL23RQ5VWK5 629 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 ZFP1Q6P2D0 407 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 TICAM1Q8IUC6 712 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 CHERPQ8IWX8 916 aaKnown RBP15.08■□□□□ 0
NCKIPSD-204ENST00000416649 KCTD17Q8N5Z5 321 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 UBR7Q8N806 425 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 PPWD1Q96BP3 646 aaKnown RBP15.08■□□□□ 0
NCKIPSD-204ENST00000416649 CIB1Q99828 191 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 RTKNQ9BST9 563 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 EXOC7Q9UPT5 735 aa15.08■□□□□ 0
NCKIPSD-204ENST00000416649 HMX2A2RU54 273 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 H3BNH8 94 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 CTBSQ01459 385 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms