RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 PSMB9P28065 219 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 CCNFP41002 786 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 PRIM2P49643 509 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 JAM2P57087 298 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 GAD2Q05329 585 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 FNBP1LQ5T0N5 605 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 APBA2Q99767 749 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 ARHGEF3Q9NR81 526 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 WWOXQ9NZC7 414 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 H2AFY2Q9P0M6 372 aaPredicted RBP13.19□□□□□ -0.3
SCN1B-202ENST00000415950 SLC12A4Q9UP95 1085 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 TIMM13Q9Y5L4 95 aaPredicted RBP13.19□□□□□ -0.3
SCN1B-202ENST00000415950 C5orf60A6NFR6 353 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 CYP2C9P11712 490 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 ACAT1P24752 427 aaKnown RBP13.18□□□□□ -0.3
SCN1B-202ENST00000415950 VEPH1Q14D04 833 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 SLC5A9Q2M3M2 681 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 MARK2Q7KZI7 788 aaKnown RBP13.18□□□□□ -0.3
SCN1B-202ENST00000415950 HDDC2Q7Z4H3 204 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 BHLHE22Q8NFJ8 381 aaPredicted RBP13.18□□□□□ -0.3
SCN1B-202ENST00000415950 TRIM45Q9H8W5 580 aaPredicted RBP13.18□□□□□ -0.3
SCN1B-202ENST00000415950 LRRC40Q9H9A6 602 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 BTBD7Q9P203 1132 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 MYH6P13533 1939 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 A0A087WZ62 844 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 SOAT2O75908 522 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 STAG3L1P0CL83 205 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 TCF4P15884 667 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 SNRPFP62306 86 aaKnown RBP13.18□□□□□ -0.3
SCN1B-202ENST00000415950 PARP6Q2NL67 630 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 BBS7Q8IWZ6 715 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 OR8H2Q8N162 312 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 RDM1Q8NG50 284 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 FAM163AQ96GL9 167 aaPredicted RBP13.18□□□□□ -0.3
SCN1B-202ENST00000415950 ZNF333Q96JL9 665 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 RPRD1AQ96P16 312 aaPredicted RBP13.18□□□□□ -0.3
SCN1B-202ENST00000415950 FDXACB1Q9BRP7 624 aaPredicted RBP13.18□□□□□ -0.3
SCN1B-202ENST00000415950 CAPN10Q9HC96 672 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 PRMT7Q9NVM4 692 aaPredicted RBP13.18□□□□□ -0.3
SCN1B-202ENST00000415950 ABI2Q9NYB9 513 aaPredicted RBP13.18□□□□□ -0.3
SCN1B-202ENST00000415950 hCG_1818297A0A087WSY0 165 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 F8W810 466 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 APOC4-APOC2K7ER74 178 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 TIMM44O43615 452 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 CST3P01034 146 aaPredicted RBP13.18□□□□□ -0.3
SCN1B-202ENST00000415950 APOC2P02655 101 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 F7P08709 466 aaPredicted RBP13.18□□□□□ -0.3
SCN1B-202ENST00000415950 CHRNB2P17787 502 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 ATP6AP1LQ52LC2 224 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 RALGPS1Q5JS13 557 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 IER5Q5VY09 327 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 TMC5Q6UXY8 1006 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 LRRC8DQ7L1W4 858 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 MICALL2Q8IY33 904 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 C12orf29Q8N999 325 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 EDEM1Q92611 657 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 JADE3Q92613 823 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 GPAMQ9HCL2 828 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 ASB14A6NK59 587 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 CLOCKO15516 846 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 TRIM13O60858 407 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 CFHP08603 1231 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 PAEPP09466 180 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 SUPT20HL2P0C7V6 817 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 ALADP13716 330 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 NAMPTP43490 491 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 ALDH1A3P47895 512 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 SERPINB8P50452 374 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 GALK1P51570 392 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 LY6KQ17RY6 165 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 ZCCHC7Q8N3Z6 543 aaKnown RBP13.18□□□□□ -0.3
SCN1B-202ENST00000415950 AKT1S1Q96B36 256 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 DPP3Q9NY33 737 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 KCNK4Q9NYG8 393 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 NCKIPSDQ9NZQ3 722 aa13.18□□□□□ -0.3
SCN1B-202ENST00000415950 CNTNAP4Q9C0A0 1308 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 ZMYM2Q9UBW7 1377 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 LYNP07948 512 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 GRK2P25098 689 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 MZF1P28698 734 aaPredicted RBP13.17□□□□□ -0.3
SCN1B-202ENST00000415950 ACADSBP45954 432 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 GTF2BQ00403 316 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 IL5RAQ01344 420 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 TAF5Q15542 800 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 CYP51A1Q16850 503 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 C10orf120Q5SQS8 335 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 ZNF572Q7Z3I7 529 aaPredicted RBP13.17□□□□□ -0.3
SCN1B-202ENST00000415950 DHDDSQ86SQ9 333 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 TRIM69Q86WT6 500 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 ATG16L2Q8NAA4 619 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 VPS37AQ8NEZ2 397 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 TRAPPC9Q96Q05 1148 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 PHF12Q96QT6 1004 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 TRIM62Q9BVG3 475 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 TMEM59LQ9UK28 342 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 RNF112Q9ULX5 631 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 ACTL7BQ9Y614 415 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 CYP3A7-CYP3A51PA0A087WV96 503 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 UBDO15205 165 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 B3GAT3O94766 335 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms