RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 PYROXD2Q8N2H3 581 aa18.51■□□□□ 0.55
SCARB1-203ENST00000415380 CCDC124Q96CT7 223 aaKnown RBP18.51■□□□□ 0.55
SCARB1-203ENST00000415380 OLFM3Q96PB7 478 aa18.51■□□□□ 0.55
SCARB1-203ENST00000415380 ADCY6O43306 1168 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 RALBP11234 206 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 ABCE1P61221 599 aaKnown RBP18.5■□□□□ 0.55
SCARB1-203ENST00000415380 DALRD3Q5D0E6 543 aaKnown RBP18.5■□□□□ 0.55
SCARB1-203ENST00000415380 ACAD11Q709F0 780 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 ZDHHC17Q8IUH5 632 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 NETO2Q8NC67 525 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.5■□□□□ 0.55
SCARB1-203ENST00000415380 FAM96AQ9H5X1 160 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 GTF2IRD1Q9UHL9 959 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 SNX9Q9Y5X1 595 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 E2F8A0AVK6 867 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 AP1G2O75843 785 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 NCF2P19878 526 aaPredicted RBP18.5■□□□□ 0.55
SCARB1-203ENST00000415380 ITGAXP20702 1163 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 CDK7P50613 346 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 POU5F1BQ06416 359 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 PEX6Q13608 980 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 SOWAHAQ2M3V2 549 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 CNKSR2Q8WXI2 1034 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 CMTM5Q96DZ9 223 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 CCDC28BQ9BUN5 200 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 CEP41Q9BYV8 373 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 CXCL16Q9H2A7 254 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 ZNF358Q9NW07 568 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 USP3Q9Y6I4 520 aa18.5■□□□□ 0.55
SCARB1-203ENST00000415380 TRIP11Q15643 1979 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 LOC100653049A0A140TA62 436 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 PPEF2O14830 753 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 KRT34O76011 436 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 VTNP04004 478 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 MYL4P12829 197 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 INSRRP14616 1297 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 HARS2P49590 506 aaKnown RBP18.49■□□□□ 0.55
SCARB1-203ENST00000415380 MSLNQ13421 630 aaPredicted RBP18.49■□□□□ 0.55
SCARB1-203ENST00000415380 NAB1Q13506 487 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 ITGA9Q13797 1035 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 INSCQ1MX18 579 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 DEFB107AQ8IZN7 70 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 AZIN2Q96A70 460 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 SYBUQ9NX95 663 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 AKT3Q9Y243 479 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 POMPQ9Y244 141 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 HACD1B0YJ81 288 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 ERVK-10P10266 1014 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 YY1P25490 414 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 TYK2P29597 1187 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 KYAT1Q16773 422 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 CFAP157Q5JU67 520 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 CES3Q6UWW8 571 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 FRMD7Q6ZUT3 714 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 IFNLR1Q8IU57 520 aaPredicted RBP18.49■□□□□ 0.55
SCARB1-203ENST00000415380 PHTF2Q8N3S3 785 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 EFCAB3Q8N7B9 438 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 HIPK4Q8NE63 616 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 TRPM4Q8TD43 1214 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 JADE3Q92613 823 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 MPHOSPH6Q99547 160 aaKnown RBP18.49■□□□□ 0.55
SCARB1-203ENST00000415380 KLHL4Q9C0H6 718 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 GGA3Q9NZ52 723 aa18.49■□□□□ 0.55
SCARB1-203ENST00000415380 SF3B1O75533 1304 aaKnown RBP eCLIP18.48■□□□□ 0.551e-6■■■■■ 69.2
SCARB1-203ENST00000415380 PEX2P28328 305 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 SNX16P57768 344 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 DEUP1Q05D60 604 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 CUL3Q13618 768 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 SLC26A9Q7LBE3 791 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 HPS6Q86YV9 775 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 GDPD5Q8WTR4 605 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 EIF2B3Q9NR50 452 aaKnown RBP18.48■□□□□ 0.55
SCARB1-203ENST00000415380 CPSF2Q9P2I0 782 aaKnown RBP18.48■□□□□ 0.55
SCARB1-203ENST00000415380 RNF103O00237 685 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 MFSD11O43934 449 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 ZMPSTE24O75844 475 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 TXNP10599 105 aaKnown RBP18.48■□□□□ 0.55
SCARB1-203ENST00000415380 LCP1P13796 627 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 GSTT1P30711 240 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 AQP4P55087 323 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 VGLL4Q14135 290 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 CNPY1Q3B7I2 92 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 LIN52Q52LA3 116 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 TCHHL1Q5QJ38 904 aaPredicted RBP18.48■□□□□ 0.55
SCARB1-203ENST00000415380 RASIP1Q5U651 963 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 HACE1Q8IYU2 909 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 C7orf31Q8N865 590 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 DPEP3Q9H4B8 488 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 ERAP1Q9NZ08 941 aa18.48■□□□□ 0.55
SCARB1-203ENST00000415380 HCRTO43612 131 aa18.47■□□□□ 0.55
SCARB1-203ENST00000415380 USP2O75604 605 aaPredicted RBP18.47■□□□□ 0.55
SCARB1-203ENST00000415380 UQCRBP14927 111 aa18.47■□□□□ 0.55
SCARB1-203ENST00000415380 CPA3P15088 417 aa18.47■□□□□ 0.55
SCARB1-203ENST00000415380 MX2P20592 715 aa18.47■□□□□ 0.55
SCARB1-203ENST00000415380 MLH1P40692 756 aa18.47■□□□□ 0.55
SCARB1-203ENST00000415380 GADL1Q6ZQY3 521 aa18.47■□□□□ 0.55
SCARB1-203ENST00000415380 CMC1Q7Z7K0 106 aa18.47■□□□□ 0.55
SCARB1-203ENST00000415380 ARHGAP18Q8N392 663 aa18.47■□□□□ 0.55
SCARB1-203ENST00000415380 P2RY11Q96G91 374 aa18.47■□□□□ 0.55
SCARB1-203ENST00000415380 SPATA16Q9BXB7 569 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms