RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 CHST9Q7L1S5 443 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 RAB44Q7Z6P3 723 aaPredicted RBP12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 SLCO6A1Q86UG4 719 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 CACUL1Q86Y37 369 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 RGL4Q8IZJ4 473 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 PPM1KQ8N3J5 372 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 CHCHD4Q8N4Q1 142 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 ZCCHC9Q8N567 271 aaKnown RBP12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 WDTC1Q8N5D0 677 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 MLKLQ8NB16 471 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 OR2T3Q8NH03 318 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 RNF139Q8WU17 664 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 PRCCQ92733 491 aaPredicted RBP12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 AZIN2Q96A70 460 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 TTC17Q96AE7 1141 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 HSFY1Q96LI6 401 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 NT5C1BQ96P26 610 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 SRRTQ9BXP5 876 aaKnown RBP12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 DNAI2Q9GZS0 605 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 TJP2Q9UDY2 1190 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 GGA2Q9UJY4 613 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 NAALADL1Q9UQQ1 740 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 NFE2L3Q9Y4A8 694 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 NEUROG3Q9Y4Z2 214 aa12.93□□□□□ -0.34
NCKIPSD-203ENST00000415281 A0A1B0GTW7 788 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 BECN2A8MW95 431 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 LTFP02788 710 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 PABPC1P11940 636 aaKnown RBP12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 SLC8A3P57103 927 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 RPS24P62847 133 aaKnown RBP12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 GCNT1Q02742 428 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 RING1Q06587 406 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 KCNH2Q12809 1159 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 SLC14A1Q13336 389 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 DPCR1Q3MIW9 517 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 CCDC40Q4G0X9 1142 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 MPP7Q5T2T1 576 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 GJB7Q6PEY0 223 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 MMS22LQ6ZRQ5 1243 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 IRF2BP1Q8IU81 584 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 CREBRFQ8IUR6 639 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 SIX6OS1Q8N1H7 587 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 KNL1Q8NG31 2342 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 BAHD1Q8TBE0 780 aaPredicted RBP12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 DQX1Q8TE96 717 aaKnown RBP12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 UCMAQ8WVF2 138 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 FOXJ1Q92949 421 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 NUP58Q9BVL2 599 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 SLC4A5Q9BY07 1137 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 MIS12Q9H081 205 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 EBF2Q9HAK2 575 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 TOR4AQ9NXH8 423 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 EIF2B4Q9UI10 523 aaKnown RBP12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 MSRB2Q9Y3D2 182 aa12.92□□□□□ -0.34
NCKIPSD-203ENST00000415281 PKD1L2Q7Z442 2459 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 M0QYV0 167 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 P4HA2O15460 535 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 PAPSS1O43252 624 aaPredicted RBP12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 TBL1XO60907 577 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 IGLV3-25P01717 112 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 SYPP08247 313 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 OXTRP30559 389 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 CTSOP43234 321 aaPredicted RBP12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 TBX4P57082 545 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 YWHAEP62258 255 aaKnown RBP12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 TAF5Q15542 800 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 WDR45BQ5MNZ6 344 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 SYCP2LQ5T4T6 812 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 DPY19L2P1Q6NXN4 242 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 SERPINA13PQ6UXR4 307 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 RABEPKQ7Z6M1 372 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 FAM124AQ86V42 546 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 CFAP52Q8N1V2 620 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 PNPLA1Q8N8W4 532 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 FIBINQ8TAL6 211 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 ADAM32Q8TC27 787 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 WFIKKN2Q8TEU8 576 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 NUCKS1Q9H1E3 243 aaKnown RBP12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 SLC32A1Q9H598 525 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 SERGEFQ9UGK8 458 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 RWDD2AQ9UIY3 292 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 AJAP1Q9UKB5 411 aaPredicted RBP12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 PCOLCE2Q9UKZ9 415 aa12.91□□□□□ -0.34
NCKIPSD-203ENST00000415281 DOCK9Q9BZ29 2069 aa12.9□□□□□ -0.34
NCKIPSD-203ENST00000415281 SRRM3A6NNA2 597 aaPredicted RBP12.9□□□□□ -0.34
NCKIPSD-203ENST00000415281 KCNK3O14649 394 aa12.9□□□□□ -0.34
NCKIPSD-203ENST00000415281 BCAT2O15382 392 aaPredicted RBP12.9□□□□□ -0.34
NCKIPSD-203ENST00000415281 ZBTB24O43167 697 aaPredicted RBP12.9□□□□□ -0.34
NCKIPSD-203ENST00000415281 SYNCRIPO60506 623 aaKnown RBP12.9□□□□□ -0.34
NCKIPSD-203ENST00000415281 DKK1O94907 266 aa12.9□□□□□ -0.34
NCKIPSD-203ENST00000415281 IGHV4-34P06331 123 aa12.9□□□□□ -0.34
NCKIPSD-203ENST00000415281 DLDP09622 509 aaKnown RBP12.9□□□□□ -0.34
NCKIPSD-203ENST00000415281 CSNK1EP49674 416 aaKnown RBP12.9□□□□□ -0.34
NCKIPSD-203ENST00000415281 ATXN3P54252 364 aaPredicted RBP12.9□□□□□ -0.34
NCKIPSD-203ENST00000415281 TRIP6Q15654 476 aaKnown RBP12.9□□□□□ -0.34
NCKIPSD-203ENST00000415281 TPD52L1Q16890 204 aaPredicted RBP12.9□□□□□ -0.34
NCKIPSD-203ENST00000415281 HLA-BQ31612 363 aa12.9□□□□□ -0.34
NCKIPSD-203ENST00000415281 MS4A13Q5J8X5 152 aa12.9□□□□□ -0.34
NCKIPSD-203ENST00000415281 ARTNQ5T4W7 220 aa12.9□□□□□ -0.34
NCKIPSD-203ENST00000415281 CCDC183Q5T5S1 534 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms