RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 H2AFY2Q9P0M6 372 aaPredicted RBP5.21□□□□□ -1.58
VPS41-205ENST00000414632 MUTYHQ9UIF7 546 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 HOOK1Q9UJC3 728 aaKnown RBP5.21□□□□□ -1.58
VPS41-205ENST00000414632 ITGA11Q9UKX5 1188 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 CBLCQ9ULV8 474 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 L1RE1Q9UN81 338 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 FAM50BQ9Y247 325 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 RAXQ9Y2V3 346 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 SNX9Q9Y5X1 595 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 U3KQE9 123 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 NUP210Q8TEM1 1887 aaPredicted RBP5.21□□□□□ -1.58
VPS41-205ENST00000414632 HELZP42694 1942 aaKnown RBP5.21□□□□□ -1.58
VPS41-205ENST00000414632 TICRRQ7Z2Z1 1910 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 ANAPC1Q9H1A4 1944 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 PATJQ8NI35 1801 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 C7orf72A4D263 438 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 H3BS24 57 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 TBC1D4O60343 1298 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 HUS1O60921 280 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 N4BP1O75113 896 aaKnown RBP5.2□□□□□ -1.58
VPS41-205ENST00000414632 ATP2C2O75185 946 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 ULK1O75385 1050 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 ABLIM3O94929 683 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 KIF20AO95235 890 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 VNN1O95497 513 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 LRG1P02750 347 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 F13BP05160 661 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 ASGR2P07307 311 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 MYBL2P10244 700 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 GJA1P17302 382 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 TYMPP19971 482 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 CCND1P24385 295 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 GRK2P25098 689 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 ELF1P32519 619 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 GRK3P35626 688 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 GRIK1P39086 918 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 MTHFRP42898 656 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 GCLMP48507 274 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 MYL6P60660 151 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 PSMC1P62191 440 aaKnown RBP5.2□□□□□ -1.58
VPS41-205ENST00000414632 SNRPFP62306 86 aaKnown RBP5.2□□□□□ -1.58
VPS41-205ENST00000414632 RBP5P82980 135 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 ITIH3Q06033 890 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 MYO1EQ12965 1108 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 DUSP4Q13115 394 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 ADAM9Q13443 819 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 TRPC3Q13507 836 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 LAPTM5Q13571 262 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 MORC3Q14149 939 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 SURF1Q15526 300 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 CRY1Q16526 586 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 INAVAQ3KP66 663 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 SLC39A12Q504Y0 691 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 ZCWPW2Q504Y3 356 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 ATAT1Q5SQI0 421 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 C1orf220Q5T0J3 134 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 ANKRD40Q6AI12 368 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 SPOPLQ6IQ16 392 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 CCDC149Q6ZUS6 474 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 METTL23Q86XA0 190 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 SPACA3Q8IXA5 215 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 C12orf56Q8IXR9 622 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 TCEAL8Q8IYN2 117 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 ADGRF2Q8IZF7 708 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 ADSSL1Q8N142 457 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 PDCL2Q8N4E4 241 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 NAT16Q8N8M0 369 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 ATAD1Q8NBU5 361 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 CLRN3Q8NCR9 226 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 ZNF461Q8TAF7 563 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 GPT2Q8TD30 523 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 PARD3BQ8TEW8 1205 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 NELFBQ8WX92 580 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 ING5Q8WYH8 240 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 PMM1Q92871 262 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 FUBP3Q96I24 572 aaKnown RBP eCLIP5.2□□□□□ -1.58
VPS41-205ENST00000414632 RIPOR3Q96MK2 946 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 GSDMAQ96QA5 445 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 MYADMQ96S97 322 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 TSPAN18Q96SJ8 248 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 MMS19Q96T76 1030 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 TSG101Q99816 390 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 MRPL45Q9BRJ2 306 aaKnown RBP5.2□□□□□ -1.58
VPS41-205ENST00000414632 PI4K2AQ9BTU6 479 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 PHF7Q9BWX1 381 aaPredicted RBP5.2□□□□□ -1.58
VPS41-205ENST00000414632 JAM3Q9BX67 310 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 RHOBTB2Q9BYZ6 727 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 PLEKHA4Q9H4M7 779 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 EPHX3Q9H6B9 360 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 SMYD3Q9H7B4 428 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 LMBRD1Q9NUN5 540 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 TMLHEQ9NVH6 421 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 DMAC2Q9NW81 257 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 DDX43Q9NXZ2 648 aaKnown RBP5.2□□□□□ -1.58
VPS41-205ENST00000414632 CGNQ9P2M7 1197 aaKnown RBP5.2□□□□□ -1.58
VPS41-205ENST00000414632 IP6K2Q9UHH9 426 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 DUSP13Q9UII6 198 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 FBXL7Q9UJT9 491 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 TRAF3IP3Q9Y228 551 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 FRMD4BQ9Y2L6 1034 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms