RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.6	□□□□□ -0.23
SF1-206	ENST00000413725	ARFGAP1	Q8N6T3	406 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	ZNF557	Q8N988	423 aa	Predicted RBP	13.6	□□□□□ -0.23
SF1-206	ENST00000413725	EDA	Q92838	391 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	BHMT	Q93088	406 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	RPRD1A	Q96P16	312 aa	Predicted RBP	13.6	□□□□□ -0.23
SF1-206	ENST00000413725	OSBPL2	Q9H1P3	480 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	KCNF1	Q9H3M0	494 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	TMPRSS4	Q9NRS4	437 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	OR12D3	Q9UGF7	316 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	VANGL2	Q9ULK5	521 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	FZD10	Q9ULW2	581 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	AP4E1	Q9UPM8	1137 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	MACROD2	A1Z1Q3	448 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.59	□□□□□ -0.23
SF1-206	ENST00000413725		I6L893	689 aa	Predicted RBP	13.59	□□□□□ -0.23
SF1-206	ENST00000413725	TNFRSF10A	O00220	468 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	GFRA2	O00451	464 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	BUB1	O43683	1085 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	SPOP	O43791	374 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	CACNG3	O60359	315 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	BUB1B	O60566	1050 aa	Predicted RBP	13.59	□□□□□ -0.23
SF1-206	ENST00000413725	TBL1X	O60907	577 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	PENK	P01210	267 aa	Predicted RBP	13.59	□□□□□ -0.23
SF1-206	ENST00000413725	GGCX	P38435	758 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	EIF2D	P41214	584 aa	Known RBP	13.59	□□□□□ -0.23
SF1-206	ENST00000413725	SOX9	P48436	509 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	NRG1	Q02297	640 aa	Predicted RBP	13.59	□□□□□ -0.23
SF1-206	ENST00000413725	PREPL	Q4J6C6	727 aa	Predicted RBP	13.59	□□□□□ -0.23
SF1-206	ENST00000413725	FYB2	Q5VWT5	728 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	C11orf63	Q6NUN7	778 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	FBXL22	Q6P050	247 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	DAAM2	Q86T65	1068 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	TPCN2	Q8NHX9	752 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	TEKT4	Q8WW24	435 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.59	□□□□□ -0.23
SF1-206	ENST00000413725	ZNF830	Q96NB3	372 aa	Predicted RBP	13.59	□□□□□ -0.23
SF1-206	ENST00000413725	PEBP4	Q96S96	227 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	EPAS1	Q99814	870 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	SNRNP25	Q9BV90	132 aa	Known RBP	13.59	□□□□□ -0.23
SF1-206	ENST00000413725	ZWILCH	Q9H900	591 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	PLK2	Q9NYY3	685 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	PPP2R2C	Q9Y2T4	447 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	DUSP10	Q9Y6W6	482 aa		13.59	□□□□□ -0.23
SF1-206	ENST00000413725	CUL9	Q8IWT3	2517 aa		13.58	□□□□□ -0.23
SF1-206	ENST00000413725	ZDBF2	Q9HCK1	2354 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725		A0A1B0GVM2	712 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	TCAF2	A6NFQ2	919 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725		E9PAM4	449 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	SRGAP2	O75044	1071 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	KRT7	P08729	469 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	HOXD9	P28356	352 aa	Predicted RBP	13.58	□□□□□ -0.24
SF1-206	ENST00000413725	L1CAM	P32004	1257 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	SGSH	P51688	502 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	ZNF135	P52742	658 aa	Predicted RBP	13.58	□□□□□ -0.24
SF1-206	ENST00000413725	RPS24	P62847	133 aa	Known RBP	13.58	□□□□□ -0.24
SF1-206	ENST00000413725	SLC25A11	Q02978	314 aa	Known RBP	13.58	□□□□□ -0.24
SF1-206	ENST00000413725	SMTNL2	Q2TAL5	461 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	GAB4	Q2WGN9	574 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	ZNF852	Q6ZMS4	543 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	ZNF662	Q6ZS27	426 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	SUGP1	Q8IWZ8	645 aa	Known RBP	13.58	□□□□□ -0.24
SF1-206	ENST00000413725	SIX5	Q8N196	739 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	CFAP52	Q8N1V2	620 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	RNF10	Q8N5U6	811 aa	Known RBP	13.58	□□□□□ -0.24
SF1-206	ENST00000413725	NAT16	Q8N8M0	369 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	FAM3C	Q92520	227 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	TBC1D31	Q96DN5	1066 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	SLC2A11	Q9BYW1	496 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	DHX35	Q9H5Z1	703 aa	Known RBP	13.58	□□□□□ -0.24
SF1-206	ENST00000413725	DNAJC17	Q9NVM6	304 aa	Known RBP	13.58	□□□□□ -0.24
SF1-206	ENST00000413725	GPATCH2L	Q9NWQ4	482 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	STIM2	Q9P246	746 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	DEC1	Q9P2X7	70 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	TRIM10	Q9UDY6	481 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	SALL4	Q9UJQ4	1053 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	MRPS17	Q9Y2R5	130 aa	Known RBP	13.58	□□□□□ -0.24
SF1-206	ENST00000413725	SNX10	Q9Y5X0	201 aa		13.58	□□□□□ -0.24
SF1-206	ENST00000413725	IGLV3-10	A0A075B6K4	115 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	KRBA1	A5PL33	1030 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	PI4K2B	G5E9Z4	385 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	ZSCAN12	O43309	604 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	CREB3	O43889	395 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	TULP3	O75386	442 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	LUC7L3	O95232	432 aa	Known RBP	13.57	□□□□□ -0.24
SF1-206	ENST00000413725	TCF4	P15884	667 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	COMT	P21964	271 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	IL1R2	P27930	398 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	HTR7	P34969	479 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	GJC1	P36383	396 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	OPRD1	P41143	372 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	DGKG	P49619	791 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	STARD6	P59095	220 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	CDH18	Q13634	790 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	C5orf22	Q49AR2	442 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.57	□□□□□ -0.24
SF1-206	ENST00000413725	ZFYVE27	Q5T4F4	411 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	IER5L	Q5T953	404 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	GRAMD4	Q6IC98	578 aa		13.57	□□□□□ -0.24
SF1-206	ENST00000413725	RWDD4	Q6NW29	188 aa	Known RBP	13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms