RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 MMS22LQ6ZRQ5 1243 aa27.27■■□□□ 1.96
VEGFA-207ENST00000413642 LPCAT2Q7L5N7 544 aa27.27■■□□□ 1.96
VEGFA-207ENST00000413642 SLC26A9Q7LBE3 791 aa27.27■■□□□ 1.96
VEGFA-207ENST00000413642 CHSY1Q86X52 802 aa27.27■■□□□ 1.96
VEGFA-207ENST00000413642 CARNMT1Q8N4J0 409 aa27.27■■□□□ 1.96
VEGFA-207ENST00000413642 ZNF366Q8N895 744 aa27.27■■□□□ 1.96
VEGFA-207ENST00000413642 WFIKKN2Q8TEU8 576 aa27.27■■□□□ 1.96
VEGFA-207ENST00000413642 IRX2Q9BZI1 471 aaPredicted RBP27.27■■□□□ 1.96
VEGFA-207ENST00000413642 MKRN2Q9H000 416 aaKnown RBP27.27■■□□□ 1.96
VEGFA-207ENST00000413642 NOCTQ9UK39 431 aaKnown RBP27.27■■□□□ 1.96
VEGFA-207ENST00000413642 MYO18AQ92614 2054 aaKnown RBP27.27■■□□□ 1.96
VEGFA-207ENST00000413642 IGHV1OR15-9A0A0B4J2B8 117 aa27.26■■□□□ 1.95
VEGFA-207ENST00000413642 LGALS16A8MUM7 142 aa27.26■■□□□ 1.95
VEGFA-207ENST00000413642 KCNU1A8MYU2 1149 aa27.26■■□□□ 1.95
VEGFA-207ENST00000413642 TFE3P19532 575 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-207ENST00000413642 CDK11BP21127 795 aaKnown RBP27.26■■□□□ 1.95
VEGFA-207ENST00000413642 JAM2P57087 298 aa27.26■■□□□ 1.95
VEGFA-207ENST00000413642 ARID5AQ03989 594 aa27.26■■□□□ 1.95
VEGFA-207ENST00000413642 LMAN2Q12907 356 aa27.26■■□□□ 1.95
VEGFA-207ENST00000413642 NME3Q13232 169 aa27.26■■□□□ 1.95
VEGFA-207ENST00000413642 BYSLQ13895 437 aaKnown RBP27.26■■□□□ 1.95
VEGFA-207ENST00000413642 STARD3Q14849 445 aa27.26■■□□□ 1.95
VEGFA-207ENST00000413642 PTPRNQ16849 979 aa27.26■■□□□ 1.95
VEGFA-207ENST00000413642 AASDHQ4L235 1098 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-207ENST00000413642 OTUD1Q5VV17 481 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-207ENST00000413642 SERPINA13PQ6UXR4 307 aa27.26■■□□□ 1.95
VEGFA-207ENST00000413642 AHI1Q8N157 1196 aa27.26■■□□□ 1.95
VEGFA-207ENST00000413642 C12orf50Q8NA57 414 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-207ENST00000413642 CPA5Q8WXQ8 436 aa27.26■■□□□ 1.95
VEGFA-207ENST00000413642 BTN2A3PQ96KV6 586 aa27.26■■□□□ 1.95
VEGFA-207ENST00000413642 PCMTD1Q96MG8 357 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-207ENST00000413642 VPS45Q9NRW7 570 aa27.26■■□□□ 1.95
VEGFA-207ENST00000413642 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.26■■□□□ 1.952e-7■■■■□ 22.2
VEGFA-207ENST00000413642 SPTBN4Q9H254 2564 aa27.26■■□□□ 1.95
VEGFA-207ENST00000413642 PATE3B3GLJ2 98 aa27.25■■□□□ 1.95
VEGFA-207ENST00000413642 NPC1O15118 1278 aa27.25■■□□□ 1.95
VEGFA-207ENST00000413642 EPHX1P07099 455 aa27.25■■□□□ 1.95
VEGFA-207ENST00000413642 CHRNB2P17787 502 aa27.25■■□□□ 1.95
VEGFA-207ENST00000413642 SNX16P57768 344 aa27.25■■□□□ 1.95
VEGFA-207ENST00000413642 UBXN1Q04323 297 aa27.25■■□□□ 1.95
VEGFA-207ENST00000413642 FNDC3BQ53EP0 1204 aaKnown RBP27.25■■□□□ 1.95
VEGFA-207ENST00000413642 NAA35Q5VZE5 725 aa27.25■■□□□ 1.95
VEGFA-207ENST00000413642 DGLUCYQ7Z3D6 616 aa27.25■■□□□ 1.95
VEGFA-207ENST00000413642 CYP2U1Q7Z449 544 aa27.25■■□□□ 1.95
VEGFA-207ENST00000413642 ERICH1Q86X53 443 aa27.25■■□□□ 1.95
VEGFA-207ENST00000413642 XYLT1Q86Y38 959 aa27.25■■□□□ 1.95
VEGFA-207ENST00000413642 ANKRD20A12PQ8NF67 263 aa27.25■■□□□ 1.95
VEGFA-207ENST00000413642 ZNF397Q8NF99 534 aaPredicted RBP27.25■■□□□ 1.95
VEGFA-207ENST00000413642 FIBINQ8TAL6 211 aa27.25■■□□□ 1.95
VEGFA-207ENST00000413642 PIGKQ92643 395 aa27.25■■□□□ 1.95
VEGFA-207ENST00000413642 RNF34Q969K3 372 aa27.25■■□□□ 1.95
VEGFA-207ENST00000413642 C18orf8Q96DM3 657 aa27.25■■□□□ 1.95
VEGFA-207ENST00000413642 PRMT1Q99873 361 aaKnown RBP27.25■■□□□ 1.95
VEGFA-207ENST00000413642 INTS6Q9UL03 887 aaKnown RBP27.25■■□□□ 1.95
VEGFA-207ENST00000413642 DCDC2BA2VCK2 349 aa27.24■■□□□ 1.95
VEGFA-207ENST00000413642 LRRC10BA6NIK2 292 aa27.24■■□□□ 1.95
VEGFA-207ENST00000413642 SYNCRIPO60506 623 aaKnown RBP27.24■■□□□ 1.95
VEGFA-207ENST00000413642 SOX5P35711 763 aa27.24■■□□□ 1.95
VEGFA-207ENST00000413642 GABRB2P47870 512 aa27.24■■□□□ 1.95
VEGFA-207ENST00000413642 CIR1Q86X95 450 aaPredicted RBP27.24■■□□□ 1.95
VEGFA-207ENST00000413642 CACUL1Q86Y37 369 aa27.24■■□□□ 1.95
VEGFA-207ENST00000413642 ATP6V0D2Q8N8Y2 350 aa27.24■■□□□ 1.95
VEGFA-207ENST00000413642 NETO1Q8TDF5 533 aa27.24■■□□□ 1.95
VEGFA-207ENST00000413642 TMEM245Q9H330 911 aa27.24■■□□□ 1.95
VEGFA-207ENST00000413642 PRDM16Q9HAZ2 1276 aa27.24■■□□□ 1.95
VEGFA-207ENST00000413642 ABCA7Q8IZY2 2146 aa27.23■■□□□ 1.95
VEGFA-207ENST00000413642 GOLGA8SH3BPF8 625 aa27.23■■□□□ 1.95
VEGFA-207ENST00000413642 M0QYT0 321 aa27.23■■□□□ 1.95
VEGFA-207ENST00000413642 LUC7L3O95232 432 aaKnown RBP27.23■■□□□ 1.95
VEGFA-207ENST00000413642 CCR1P32246 355 aa27.23■■□□□ 1.95
VEGFA-207ENST00000413642 NOS2P35228 1153 aa27.23■■□□□ 1.95
VEGFA-207ENST00000413642 GGCXP38435 758 aa27.23■■□□□ 1.95
VEGFA-207ENST00000413642 NUMBP49757 651 aa27.23■■□□□ 1.95
VEGFA-207ENST00000413642 COPAP53621 1224 aa27.23■■□□□ 1.95
VEGFA-207ENST00000413642 NOMO3P69849 1222 aa27.23■■□□□ 1.95
VEGFA-207ENST00000413642 RPL6Q02878 288 aaKnown RBP27.23■■□□□ 1.95
VEGFA-207ENST00000413642 TMPRSS6Q8IU80 811 aa27.23■■□□□ 1.95
VEGFA-207ENST00000413642 SPAG5Q96R06 1193 aa27.23■■□□□ 1.95
VEGFA-207ENST00000413642 MTG2Q9H4K7 406 aa27.23■■□□□ 1.95
VEGFA-207ENST00000413642 TMEM74BQ9NUR3 256 aa27.23■■□□□ 1.95
VEGFA-207ENST00000413642 PLA2G4CQ9UP65 541 aa27.23■■□□□ 1.95
VEGFA-207ENST00000413642 ATXN2Q99700 1313 aaKnown RBP27.22■■□□□ 1.95
VEGFA-207ENST00000413642 TYW5A2RUC4 315 aaKnown RBP27.22■■□□□ 1.95
VEGFA-207ENST00000413642 ZNF217O75362 1048 aa27.22■■□□□ 1.95
VEGFA-207ENST00000413642 DLDP09622 509 aaKnown RBP27.22■■□□□ 1.95
VEGFA-207ENST00000413642 POLR2EP19388 210 aaKnown RBP27.22■■□□□ 1.95
VEGFA-207ENST00000413642 ABCB4P21439 1286 aa27.22■■□□□ 1.95
VEGFA-207ENST00000413642 MATKP42679 507 aa27.22■■□□□ 1.95
VEGFA-207ENST00000413642 FMO1Q01740 532 aa27.22■■□□□ 1.95
VEGFA-207ENST00000413642 CDH18Q13634 790 aa27.22■■□□□ 1.95
VEGFA-207ENST00000413642 FAM102AQ5T9C2 384 aaPredicted RBP27.22■■□□□ 1.95
VEGFA-207ENST00000413642 PHLDB2Q86SQ0 1253 aa27.22■■□□□ 1.95
VEGFA-207ENST00000413642 ZDHHC17Q8IUH5 632 aa27.22■■□□□ 1.95
VEGFA-207ENST00000413642 NEK11Q8NG66 645 aa27.22■■□□□ 1.95
VEGFA-207ENST00000413642 NPY6RQ99463 290 aa27.22■■□□□ 1.95
VEGFA-207ENST00000413642 ANLNQ9NQW6 1124 aa27.22■■□□□ 1.95
VEGFA-207ENST00000413642 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.22■■□□□ 1.954e-6■□□□□ 10.5
VEGFA-207ENST00000413642 SLC12A6Q9UHW9 1150 aa27.22■■□□□ 1.95
VEGFA-207ENST00000413642 CEP250Q9BV73 2442 aa27.22■■□□□ 1.95
VEGFA-207ENST00000413642 F5H5T6 163 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms