RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ADAM28Q9UKQ2 775 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 BRWD3Q6RI45 1802 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 A0A0A0MRY4 1105 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 A6NJR5 290 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 TMEM114B3SHH9 223 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 C19orf81C9J6K1 198 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 STAU1O95793 577 aaKnown RBP18.1■□□□□ 0.49
SDCBP-202ENST00000413219 CPA3P15088 417 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 MAGEA12P43365 314 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 NDST1P52848 882 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 FSTL1Q12841 308 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 JADE1Q6IE81 842 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 CASC4Q6P4E1 433 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 TMEM192Q8IY95 271 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 LRRC71Q8N4P6 559 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 ZFRQ96KR1 1074 aaKnown RBP18.1■□□□□ 0.49
SDCBP-202ENST00000413219 SPATA13Q96N96 652 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 SERPINI1Q99574 410 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 ASB7Q9H672 318 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 TMEM216Q9P0N5 145 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 AFG3L2Q9Y4W6 797 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 BTBD19C9JJ37 291 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 INO80B-WBP1J3KQ70 363 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 PIK3R2O00459 728 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 B4GALT5O43286 388 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 DCXO43602 365 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 GP5P40197 560 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 PTPN9P43378 593 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 HMGCS2P54868 508 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 HDAC4P56524 1084 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 SNX16P57768 344 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 CXCL9Q07325 125 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 ARMC3Q5W041 872 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 ZFP1Q6P2D0 407 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 METTL7BQ6UX53 244 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 LCA5Q86VQ0 697 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 ALDH16A1Q8IZ83 802 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 HIPK4Q8NE63 616 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 ARNTL2Q8WYA1 636 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 KHSRPQ92945 711 aaKnown RBP eCLIP18.1■□□□□ 0.495e-6■■■■□ 22.3
SDCBP-202ENST00000413219 DCUN1D1Q96GG9 259 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 HPDLQ96IR7 371 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 NT5C1AQ9BXI3 368 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 SLC4A5Q9BY07 1137 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 SHCBP1LQ9BZQ2 653 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 INO80BQ9C086 356 aaPredicted RBP18.1■□□□□ 0.49
SDCBP-202ENST00000413219 BCAP29Q9UHQ4 241 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 VPS28Q9UK41 221 aa18.1■□□□□ 0.49
SDCBP-202ENST00000413219 SCN4AP35499 1836 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 LOC100653049A0A140TA62 436 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 ZBTB42B2RXF5 422 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 GPR25O00155 361 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 ZBTB14O43829 449 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 H2AFYO75367 372 aaKnown RBP18.09■□□□□ 0.49
SDCBP-202ENST00000413219 DGKIO75912 1065 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 KRT34O76011 436 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 ASLP04424 464 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 TGFB3P10600 412 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 THRAP10827 490 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 PTPRAP18433 802 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 TYK2P29597 1187 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 TNFAIP2Q03169 654 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 TLR1Q15399 786 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 TMEM259Q4ZIN3 620 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 GRTP1Q5TC63 336 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 VWA5B1Q5TIE3 1220 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 DCAF15Q66K64 600 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 DPH6Q7L8W6 267 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 TMEM110Q86TL2 294 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 ZDHHC17Q8IUH5 632 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 LRRN4Q8WUT4 740 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 HTR3CQ8WXA8 447 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 CLMNQ96JQ2 1002 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 GCNAQ96QF7 691 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 CPNE1Q99829 537 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 QTRT2Q9H974 415 aaKnown RBP18.09■□□□□ 0.49
SDCBP-202ENST00000413219 COG4Q9H9E3 785 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 PRDM16Q9HAZ2 1276 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 PICK1Q9NRD5 415 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 HOXC10Q9NYD6 342 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 SLC17A6Q9P2U8 582 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 HESX1Q9UBX0 185 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 PPP1R1BQ9UD71 204 aaPredicted RBP18.09■□□□□ 0.49
SDCBP-202ENST00000413219 ZNF112Q9UJU3 913 aa18.09■□□□□ 0.49
SDCBP-202ENST00000413219 CAPN8A6NHC0 703 aa18.08■□□□□ 0.49
SDCBP-202ENST00000413219 SLC22A2O15244 555 aa18.08■□□□□ 0.49
SDCBP-202ENST00000413219 FBXO21O94952 628 aa18.08■□□□□ 0.49
SDCBP-202ENST00000413219 STAG3L1P0CL83 205 aa18.08■□□□□ 0.49
SDCBP-202ENST00000413219 GLDCP23378 1020 aa18.08■□□□□ 0.49
SDCBP-202ENST00000413219 EDNRBP24530 442 aa18.08■□□□□ 0.49
SDCBP-202ENST00000413219 GOLGA7BQ2TAP0 167 aa18.08■□□□□ 0.49
SDCBP-202ENST00000413219 PKDCCQ504Y2 493 aa18.08■□□□□ 0.49
SDCBP-202ENST00000413219 RARS2Q5T160 578 aaKnown RBP18.08■□□□□ 0.49
SDCBP-202ENST00000413219 C16orf89Q6UX73 402 aa18.08■□□□□ 0.49
SDCBP-202ENST00000413219 AHI1Q8N157 1196 aa18.08■□□□□ 0.49
SDCBP-202ENST00000413219 SREK1Q8WXA9 508 aaKnown RBP18.08■□□□□ 0.49
SDCBP-202ENST00000413219 CNDP1Q96KN2 507 aa18.08■□□□□ 0.49
SDCBP-202ENST00000413219 MRPS26Q9BYN8 205 aaKnown RBP18.08■□□□□ 0.49
SDCBP-202ENST00000413219 MTMR10Q9NXD2 777 aa18.08■□□□□ 0.49
SDCBP-202ENST00000413219 TXNDC16Q9P2K2 825 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms