RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 RNF34Q969K3 372 aa8.51□□□□□ -1.05
RPE-204ENST00000411934 ZNF653Q96CK0 615 aa8.51□□□□□ -1.05
RPE-204ENST00000411934 TMA16Q96EY4 203 aaKnown RBP8.51□□□□□ -1.05
RPE-204ENST00000411934 CCDC42Q96M95 316 aa8.51□□□□□ -1.05
RPE-204ENST00000411934 CFAP57Q96MR6 1250 aa8.51□□□□□ -1.05
RPE-204ENST00000411934 MCEEQ96PE7 176 aa8.51□□□□□ -1.05
RPE-204ENST00000411934 PPP1R9BQ96SB3 815 aa8.51□□□□□ -1.05
RPE-204ENST00000411934 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.51□□□□□ -1.05
RPE-204ENST00000411934 LUC7LQ9NQ29 371 aaKnown RBP8.51□□□□□ -1.05
RPE-204ENST00000411934 ARHGEF4Q9NR80 690 aa8.51□□□□□ -1.05
RPE-204ENST00000411934 PIGVQ9NUD9 493 aa8.51□□□□□ -1.05
RPE-204ENST00000411934 DNAJC17Q9NVM6 304 aaKnown RBP8.51□□□□□ -1.05
RPE-204ENST00000411934 TAS2R14Q9NYV8 317 aa8.51□□□□□ -1.05
RPE-204ENST00000411934 UVRAGQ9P2Y5 699 aa8.51□□□□□ -1.05
RPE-204ENST00000411934 CNOT8Q9UFF9 292 aaKnown RBP8.51□□□□□ -1.05
RPE-204ENST00000411934 NDRG2Q9UN36 371 aaKnown RBP8.51□□□□□ -1.05
RPE-204ENST00000411934 IGLV3-10A0A075B6K4 115 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 CCDC163A0A0D9SF12 145 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 TMEM191CA6NGB0 347 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 TIMM44O43615 452 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 AKR1B10O60218 316 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 CLDN11O75508 207 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 LUC7L3O95232 432 aaKnown RBP8.5□□□□□ -1.05
RPE-204ENST00000411934 LCA5LO95447 670 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 CYP1A2P05177 515 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 PLEKP08567 350 aaPredicted RBP8.5□□□□□ -1.05
RPE-204ENST00000411934 H2AFZP0C0S5 128 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 HNRNPLP14866 589 aaKnown RBP eCLIP8.5□□□□□ -1.05
RPE-204ENST00000411934 CD72P21854 359 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 SLC6A4P31645 630 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 RFC1P35251 1148 aaPredicted RBP8.5□□□□□ -1.05
RPE-204ENST00000411934 CYLC1P35663 651 aaPredicted RBP8.5□□□□□ -1.05
RPE-204ENST00000411934 EIF4A3P38919 411 aaKnown RBP8.5□□□□□ -1.05
RPE-204ENST00000411934 PTPN5P54829 565 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 VCPP55072 806 aaKnown RBP8.5□□□□□ -1.05
RPE-204ENST00000411934 NME3Q13232 169 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 PIGHQ14442 188 aaPredicted RBP8.5□□□□□ -1.05
RPE-204ENST00000411934 CCDC14Q49A88 953 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 CCDC122Q5T0U0 273 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 TRNP1Q6NT89 227 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 H2AFVQ71UI9 128 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 SYT13Q7L8C5 426 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 C12orf40Q86WS4 652 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 MFN1Q8IWA4 741 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 AHI1Q8N157 1196 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 EMC1Q8N766 993 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 KDM1BQ8NB78 822 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 JOSD2Q8TAC2 188 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 FIBINQ8TAL6 211 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 FAM172AQ8WUF8 416 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 CTNNBL1Q8WYA6 563 aaPredicted RBP8.5□□□□□ -1.05
RPE-204ENST00000411934 CALR3Q96L12 384 aaKnown RBP8.5□□□□□ -1.05
RPE-204ENST00000411934 PRICKLE1Q96MT3 831 aaPredicted RBP8.5□□□□□ -1.05
RPE-204ENST00000411934 TKTL2Q9H0I9 626 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 OSBPL2Q9H1P3 480 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 NHEJ1Q9H9Q4 299 aaPredicted RBP8.5□□□□□ -1.05
RPE-204ENST00000411934 LMAN1LQ9HAT1 526 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 DONSONQ9NYP3 566 aa8.5□□□□□ -1.05
RPE-204ENST00000411934 PPARGC1AQ9UBK2 798 aaKnown RBP8.5□□□□□ -1.05
RPE-204ENST00000411934 K7EQS6 105 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 SCAMP3O14828 347 aaKnown RBP8.49□□□□□ -1.05
RPE-204ENST00000411934 CCP110O43303 1012 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 LAMTOR5O43504 91 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 PI15O43692 258 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 RNF40O75150 1001 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 PAGE1O75459 146 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 RNF8O76064 485 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 MOCS3O95396 460 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 MOCS2O96007 188 aaPredicted RBP8.49□□□□□ -1.05
RPE-204ENST00000411934 EGFP01133 1207 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 ASLP04424 464 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 DCNP07585 359 aaKnown RBP8.49□□□□□ -1.05
RPE-204ENST00000411934 CISD3P0C7P0 127 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 TMEM253P0C7T8 217 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 CHRM1P11229 460 aaPredicted RBP8.49□□□□□ -1.05
RPE-204ENST00000411934 HOXC13P31276 330 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 ADRA1BP35368 520 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 PCK1P35558 622 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 KIR2DL1P43626 348 aaPredicted RBP8.49□□□□□ -1.05
RPE-204ENST00000411934 VASPP50552 380 aaPredicted RBP8.49□□□□□ -1.05
RPE-204ENST00000411934 NRLP54845 237 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 ADKP55263 362 aaKnown RBP8.49□□□□□ -1.05
RPE-204ENST00000411934 CDH4P55283 916 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 HDAC4P56524 1084 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 GSDMDP57764 484 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 RPL7AP62424 266 aaKnown RBP8.49□□□□□ -1.05
RPE-204ENST00000411934 CDH18Q13634 790 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 AUHQ13825 339 aaKnown RBP8.49□□□□□ -1.05
RPE-204ENST00000411934 TCEAL1Q15170 157 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 EOGTQ5NDL2 527 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 MANEALQ5VSG8 457 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 RAP1GAP2Q684P5 730 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 ZC3H14Q6PJT7 736 aaKnown RBP8.49□□□□□ -1.05
RPE-204ENST00000411934 LRRC31Q6UY01 552 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 ZNF783Q6ZMS7 281 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 SETD3Q86TU7 594 aaPredicted RBP8.49□□□□□ -1.05
RPE-204ENST00000411934 TMTC1Q8IUR5 882 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 RHOT2Q8IXI1 618 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 LGI2Q8N0V4 545 aa8.49□□□□□ -1.05
RPE-204ENST00000411934 TXLNBQ8N3L3 684 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms