RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 SLC44A5Q8NCS7 719 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 NGDNQ8NEJ9 315 aaKnown RBP2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 OR56A3Q8NH54 315 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 OIT3Q8WWZ8 545 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 PPM1EQ8WY54 764 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 ZNF566Q969W8 418 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 SPSB4Q96A44 273 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 CTHRC1Q96CG8 243 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 STK33Q9BYT3 514 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 CD93Q9NPY3 652 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 XPNPEP3Q9NQH7 507 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 TM7SF3Q9NS93 570 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 ZSCAN32Q9NX65 697 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 MSRB1Q9NZV6 116 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 CAPN11Q9UMQ6 739 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 CEP83Q9Y592 693 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 MROH2BQ7Z745 1585 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 BAZ1AQ9NRL2 1556 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 NOTCH3Q9UM47 2321 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 LOC102723971A0A1B0GUV8 181 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 GOLGA6L3A6NEY3 463 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 SPTLC2O15270 562 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 FFAR2O15552 330 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 PIP5K1CO60331 668 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 NBNO60934 754 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 INMTO95050 263 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 TPM2P07951 284 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 ACAA1P09110 424 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 MYL4P12829 197 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 BTF3P20290 206 aaKnown RBP2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 GRK6P43250 576 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 EGR4Q05215 589 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 TRIM14Q14142 442 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 KPNB1Q14974 876 aaKnown RBP2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 PUM3Q15397 648 aaKnown RBP2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 PTCHD3Q3KNS1 767 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 TUBB8Q3ZCM7 444 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 PLA1AQ53H76 456 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 TLDC1Q6P9B6 456 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 TRAPPC11Q7Z392 1133 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 KRT28Q7Z3Y7 464 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 GAS2L3Q86XJ1 694 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 YAF2Q8IY57 180 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 TXLNBQ8N3L3 684 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 C12orf76Q8N812 135 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 ANKRD42Q8N9B4 389 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 ZNF527Q8NB42 609 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 MYRIPQ8NFW9 859 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 GDF15Q99988 308 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 TM2D2Q9BX73 214 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 STK31Q9BXU1 1019 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 MS4A7Q9GZW8 240 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 DHX36Q9H2U1 1008 aaKnown RBP2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 AGO4Q9HCK5 861 aaKnown RBP2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 ARL8BQ9NVJ2 186 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 WNT16Q9UBV4 365 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 ZNF212Q9UDV6 495 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 ITGB1BP2Q9UKP3 347 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 PCDHA12Q9UN75 941 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 MAN2B2Q9Y2E5 1009 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 LAS1LQ9Y4W2 734 aaKnown RBP2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 SIRT4Q9Y6E7 314 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 MORC2Q9Y6X9 1032 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 CCNB3Q8WWL7 1395 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 RAB3GAP2Q9H2M9 1393 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 FHAD1B1AJZ9 1412 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 SETD5Q9C0A6 1442 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 MAP3K1Q13233 1512 aa2.82□□□□□ -1.96
HMGB3P2-201ENST00000411913 A0A0U1RQG5 324 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 TMEM233B4DJY2 109 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 F8W810 466 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 FYB1O15117 783 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 CCP110O43303 1012 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 KCNQ3O43525 872 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 SPRY2O43597 315 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 LDB3O75112 727 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 SKAP2O75563 359 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 RASSF9O75901 435 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 CSTBP04080 98 aaKnown RBP2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 EPHA3P29320 983 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 CHKAP35790 457 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 COPAP53621 1224 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 BCAT1P54687 386 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 KRTAP10-12P60413 245 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 BLMHQ13867 455 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 SLC29A2Q14542 456 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 INSCQ1MX18 579 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 IZUMO4Q1ZYL8 232 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 CCDC38Q502W7 563 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 CCDC174Q6PII3 467 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 USP17L6PQ6QN14 398 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 SMAP1Q8IYB5 467 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 SPATA5Q8NB90 893 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 CCDC150Q8NCX0 1101 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 LMO3Q8TAP4 145 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 BCAS4Q8TDM0 211 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 CCT6BQ92526 530 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 PPP1R9BQ96SB3 815 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 SIN3AQ96ST3 1273 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 MAGEB5Q9BZ81 275 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms