RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 CRLF3Q8IUI8 442 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 SLC44A1Q8WWI5 657 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 C18orf25Q96B23 403 aaPredicted RBP13.41□□□□□ -0.26
CLINT1-201ENST00000411809 DPEP3Q9H4B8 488 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 ETNK2Q9NVF9 386 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 PIH1D1Q9NWS0 290 aaKnown RBP13.41□□□□□ -0.26
CLINT1-201ENST00000411809 SNTG2Q9NY99 539 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 MAGED2Q9UNF1 606 aaPredicted RBP13.41□□□□□ -0.26
CLINT1-201ENST00000411809 TTLL3Q9Y4R7 772 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 PTPRDP23468 1912 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.41□□□□□ -0.26
CLINT1-201ENST00000411809 MCF2LO15068 1137 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 SPTLC1O15269 473 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 PEX2P28328 305 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 GMPRP36959 345 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 AQP4P55087 323 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 DLG1Q12959 904 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 TRIP10Q15642 601 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 PDCD2Q16342 344 aaPredicted RBP13.41□□□□□ -0.26
CLINT1-201ENST00000411809 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.41□□□□□ -0.26
CLINT1-201ENST00000411809 TMEM40Q8WWA1 233 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 NT5C3BQ969T7 300 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 TSPAN18Q96SJ8 248 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 TINF2Q9BSI4 451 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 MMADHCQ9H3L0 296 aaPredicted RBP13.41□□□□□ -0.26
CLINT1-201ENST00000411809 DARSP14868 501 aaKnown RBP13.4□□□□□ -0.26
CLINT1-201ENST00000411809 ROR1Q01973 937 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 SLC10A2Q12908 348 aaPredicted RBP13.4□□□□□ -0.26
CLINT1-201ENST00000411809 DGKDQ16760 1214 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 SLC5A9Q2M3M2 681 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 TRMT5Q32P41 509 aaKnown RBP13.4□□□□□ -0.26
CLINT1-201ENST00000411809 BOLA3Q53S33 107 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 SLC26A9Q7LBE3 791 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 APLFQ8IW19 511 aaPredicted RBP13.4□□□□□ -0.26
CLINT1-201ENST00000411809 ST13P4Q8IZP2 240 aaPredicted RBP13.4□□□□□ -0.26
CLINT1-201ENST00000411809 AGR3Q8TD06 166 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 OLFM3Q96PB7 478 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 CENPKQ9BS16 269 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 SNRNP25Q9BV90 132 aaKnown RBP13.4□□□□□ -0.26
CLINT1-201ENST00000411809 MIS12Q9H081 205 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 WWP1Q9H0M0 922 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 ABHD16BQ9H3Z7 469 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 SLC17A6Q9P2U8 582 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 ZC3H7BQ9UGR2 993 aaKnown RBP13.4□□□□□ -0.26
CLINT1-201ENST00000411809 HCRTO43612 131 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 GRAP2O75791 330 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 IL1BP01584 269 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 PROCP04070 461 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 GTF2A2P52657 109 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 YWHAZP63104 245 aaKnown RBP13.4□□□□□ -0.26
CLINT1-201ENST00000411809 DEUP1Q05D60 604 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 MED21Q13503 144 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 RABGAP1LQ5R372 815 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 SESTD1Q86VW0 696 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.4□□□□□ -0.26
CLINT1-201ENST00000411809 TTC16Q8NEE8 873 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 OR6Y1Q8NGX8 325 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 LPIN3Q9BQK8 851 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 SYT17Q9BSW7 474 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 POPDC2Q9HBU9 364 aa13.4□□□□□ -0.26
CLINT1-201ENST00000411809 DMAP1Q9NPF5 467 aaPredicted RBP13.4□□□□□ -0.26
CLINT1-201ENST00000411809 GLTPD2A6NH11 291 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 RRN3P2A6NIE6 340 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 CAPN14A8MX76 684 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 NCF2P19878 526 aaPredicted RBP13.39□□□□□ -0.27
CLINT1-201ENST00000411809 KCNA4P22459 653 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 PRKCHP24723 683 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 RAP1GDS1P52306 607 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 CDH6P55285 790 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 TBC1D25Q3MII6 688 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 MMEL1Q495T6 779 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 VWA5B1Q5TIE3 1220 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 BSPRYQ5W0U4 402 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 NET1Q7Z628 596 aaPredicted RBP13.39□□□□□ -0.27
CLINT1-201ENST00000411809 ACOT1Q86TX2 421 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 SETD4Q9NVD3 440 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 DOCK3Q8IZD9 2030 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 MAGEC1O60732 1142 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 KRT37O76014 449 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 TGDSO95455 350 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 SMIM10L2AP0DMW4 78 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 SMIM10L2BP0DMW5 78 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 MSX2P35548 267 aaPredicted RBP13.39□□□□□ -0.27
CLINT1-201ENST00000411809 GRIA2P42262 883 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 CDK7P50613 346 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 RPL10AP62906 217 aaKnown RBP13.39□□□□□ -0.27
CLINT1-201ENST00000411809 MRPS5P82675 430 aaKnown RBP13.39□□□□□ -0.27
CLINT1-201ENST00000411809 KIZQ2M2Z5 673 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 TRMT10BQ6PF06 316 aaKnown RBP13.39□□□□□ -0.27
CLINT1-201ENST00000411809 SLC26A11Q86WA9 606 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 CHSY1Q86X52 802 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 MYLK4Q86YV6 388 aaPredicted RBP13.39□□□□□ -0.27
CLINT1-201ENST00000411809 UNC5BQ8IZJ1 945 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 FAM172AQ8WUF8 416 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 GCNAQ96QF7 691 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 NR1H4Q96RI1 486 aaPredicted RBP13.39□□□□□ -0.27
CLINT1-201ENST00000411809 GPATCH2LQ9NWQ4 482 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 KCNK4Q9NYG8 393 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 NRCAMQ92823 1304 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 MYOCOSA0A1B0GUC4 107 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms