RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 PPP2R5DQ14738 602 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 FBXO43Q4G163 708 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 FSCBQ5H9T9 825 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 FBXL22Q6P050 247 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 DCUN1D2Q6PH85 259 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 SND1Q7KZF4 910 aaKnown RBP eCLIP12.39□□□□□ -0.43
NEDD1-202ENST00000411739 ZNF513Q8N8E2 541 aaPredicted RBP12.39□□□□□ -0.43
NEDD1-202ENST00000411739 OR8K1Q8NGG5 319 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 ZNF653Q96CK0 615 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 PRMT1Q99873 361 aaKnown RBP12.39□□□□□ -0.43
NEDD1-202ENST00000411739 CNOT8Q9UFF9 292 aaKnown RBP12.39□□□□□ -0.43
NEDD1-202ENST00000411739 CHURC1-FNTBB4DL54 471 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 K7ESF4 209 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 RTN2O75298 545 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 SLC2A3P11169 496 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 GPD1P21695 349 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 TNFRSF4P43489 277 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 FNTBP49356 437 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 GFPT1Q06210 699 aaPredicted RBP12.39□□□□□ -0.43
NEDD1-202ENST00000411739 SRSF5Q13243 272 aaKnown RBP12.39□□□□□ -0.43
NEDD1-202ENST00000411739 MAMLD1Q13495 774 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 AUHQ13825 339 aaKnown RBP12.39□□□□□ -0.43
NEDD1-202ENST00000411739 DMC1Q14565 340 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 TMEM92Q6UXU6 159 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 MFN1Q8IWA4 741 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 FAM172AQ8WUF8 416 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 PRRX2Q99811 253 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 CIPCQ9C0C6 399 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 PRMT8Q9NR22 394 aaPredicted RBP12.39□□□□□ -0.43
NEDD1-202ENST00000411739 CACNA2D2Q9NY47 1150 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 SLC8A2Q9UPR5 921 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 F5H5T6 163 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 CCP110O43303 1012 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 SRGAP2O75044 1071 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 ADAM23O75077 832 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 RDXP35241 583 aaKnown RBP12.38□□□□□ -0.43
NEDD1-202ENST00000411739 NUBP1P53384 320 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 PPP1R15BQ5SWA1 713 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 SCYL2Q6P3W7 929 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 HJURPQ8NCD3 748 aaPredicted RBP12.38□□□□□ -0.43
NEDD1-202ENST00000411739 CYB5D2Q8WUJ1 264 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 IQCDQ96DY2 449 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 RPRD1AQ96P16 312 aaPredicted RBP12.38□□□□□ -0.43
NEDD1-202ENST00000411739 DDX50Q9BQ39 737 aaKnown RBP12.38□□□□□ -0.43
NEDD1-202ENST00000411739 ABHD10Q9NUJ1 306 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 ARHGEF38Q9NXL2 777 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 RRN3Q9NYV6 651 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 RAD54BQ9Y620 910 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 KIAA1549LQ6ZVL6 1849 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 MFAP3LO75121 409 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 CNTN5O94779 1100 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 GZMAP12544 262 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 TDGF1P13385 188 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 HDAC4P56524 1084 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 TBX2Q13207 712 aaPredicted RBP12.38□□□□□ -0.43
NEDD1-202ENST00000411739 CCDC122Q5T0U0 273 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 DAB2IPQ5VWQ8 1189 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 BNIPLQ7Z465 357 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 CCDC185Q8N715 623 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 PGAP3Q96FM1 320 aaPredicted RBP12.38□□□□□ -0.43
NEDD1-202ENST00000411739 DNAJC7Q99615 494 aa12.38□□□□□ -0.43
NEDD1-202ENST00000411739 BZW2Q9Y6E2 419 aaKnown RBP12.38□□□□□ -0.43
NEDD1-202ENST00000411739 H0Y626 953 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 ATG13O75143 517 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 F9P00740 461 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 GSCP56915 257 aaPredicted RBP12.37□□□□□ -0.43
NEDD1-202ENST00000411739 LMAN2Q12907 356 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 CHST9Q7L1S5 443 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 ARCQ7LC44 396 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 ANKS1BQ7Z6G8 1248 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 CHPFQ8IZ52 775 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 ZNF366Q8N895 744 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 PACSIN1Q9BY11 444 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 THAP2Q9H0W7 228 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 ISCUQ9H1K1 167 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 PARVAQ9NVD7 372 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 MPP6Q9NZW5 540 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 GGA2Q9UJY4 613 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 INVSQ9Y283 1065 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 SLC27A6Q9Y2P4 619 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 AKR1B15C9JRZ8 316 aaPredicted RBP12.37□□□□□ -0.43
NEDD1-202ENST00000411739 TPM1P09493 284 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 MRPS21P82921 87 aaKnown RBP12.37□□□□□ -0.43
NEDD1-202ENST00000411739 CDH18Q13634 790 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 TRIM14Q14142 442 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 ALFQ53S48 1182 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 BRMS1LQ5PSV4 323 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 PLEKHA7Q6IQ23 1121 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 ALKBH5Q6P6C2 394 aaKnown RBP12.37□□□□□ -0.43
NEDD1-202ENST00000411739 SYT13Q7L8C5 426 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 ADIPOR2Q86V24 386 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 VPS36Q86VN1 386 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 OR52K2Q8NGK3 314 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 ARHGEF26Q96DR7 871 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 BTBD6Q96KE9 485 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 KCNH6Q9H252 994 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 SPTLC3Q9NUV7 552 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 ELOVL2Q9NXB9 296 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 FBXO4Q9UKT5 387 aa12.37□□□□□ -0.43
NEDD1-202ENST00000411739 TYW5A2RUC4 315 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms