RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 LAMA5O15230 3695 aa14.84□□□□□ -0.03
HLA-DQB2-229ENST00000411527 URB1O60287 2271 aaKnown RBP14.83□□□□□ -0.03
HLA-DQB2-229ENST00000411527 PLXNA2O75051 1894 aa14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 GOLGA6L7A0A1B0GV03 622 aa14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 PCDHGA12O60330 932 aa14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 TBL1XO60907 577 aa14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 EPB41P11171 864 aaKnown RBP14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 LCP1P13796 627 aa14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 CD70P32970 193 aa14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 CTSKP43235 329 aa14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 IL9RQ01113 521 aa14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 CAMK2BQ13554 666 aa14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 EDRF1Q3B7T1 1238 aa14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 TCERG1LQ5VWI1 586 aa14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 ZNF776Q68DI1 518 aaPredicted RBP14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 RFWD3Q6PCD5 774 aa14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 ENGASEQ8NFI3 743 aa14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 WFDC5Q8TCV5 224 aa14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 GANCQ8TET4 914 aa14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 GOLGA1Q92805 767 aa14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 NCKAP1Q9Y2A7 1128 aa14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 APC2O95996 2303 aa14.83□□□□□ -0.04
HLA-DQB2-229ENST00000411527 FAM47DPA6NHR8 397 aa14.82□□□□□ -0.04
HLA-DQB2-229ENST00000411527 CETN3O15182 167 aa14.82□□□□□ -0.04
HLA-DQB2-229ENST00000411527 C21orf59P57076 290 aa14.82□□□□□ -0.04
HLA-DQB2-229ENST00000411527 CUL2Q13617 745 aa14.82□□□□□ -0.04
HLA-DQB2-229ENST00000411527 SMAD1Q15797 465 aaKnown RBP14.82□□□□□ -0.04
HLA-DQB2-229ENST00000411527 PIK3R6Q5UE93 754 aa14.82□□□□□ -0.04
HLA-DQB2-229ENST00000411527 KIAA0895LQ68EN5 471 aa14.82□□□□□ -0.04
HLA-DQB2-229ENST00000411527 DHRS13Q6UX07 377 aa14.82□□□□□ -0.04
HLA-DQB2-229ENST00000411527 KRBA2Q6ZNG9 492 aa14.82□□□□□ -0.04
HLA-DQB2-229ENST00000411527 PDCD7Q8N8D1 485 aaKnown RBP14.82□□□□□ -0.04
HLA-DQB2-229ENST00000411527 KCTD13Q8WZ19 329 aa14.82□□□□□ -0.04
HLA-DQB2-229ENST00000411527 ORAI3Q9BRQ5 295 aa14.82□□□□□ -0.04
HLA-DQB2-229ENST00000411527 RSPH9Q9H1X1 276 aaPredicted RBP14.82□□□□□ -0.04
HLA-DQB2-229ENST00000411527 CNGB3Q9NQW8 809 aa14.82□□□□□ -0.04
HLA-DQB2-229ENST00000411527 STIM2Q9P246 746 aa14.82□□□□□ -0.04
HLA-DQB2-229ENST00000411527 FAM237AA0A1B0GTK4 181 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 DFNA5O60443 496 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 IGHV4-34P06331 123 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 SETSIPP0DME0 302 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 VDRP11473 427 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 SLC6A4P31645 630 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 SLC11A2P49281 568 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 DAOAP59103 153 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 ST8SIA6P61647 398 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 YWHAEP62258 255 aaKnown RBP14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 RACK1P63244 317 aaKnown RBP14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 INAVAQ3KP66 663 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 CBWD6Q4V339 395 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 DCAF17Q5H9S7 520 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 CBWD3Q5JTY5 395 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 CBWD5Q5RIA9 395 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 PRAMEF14Q5SWL7 426 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 MPP7Q5T2T1 576 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 USP30Q70CQ3 517 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 MFN1Q8IWA4 741 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 UNC45BQ8IWX7 931 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 SMYD4Q8IYR2 804 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 SCML4Q8N228 414 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 BBC3Q96PG8 261 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 ACE2Q9BYF1 805 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 PABPC3Q9H361 631 aaKnown RBP14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 FBXL12Q9NXK8 326 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 FTSJ1Q9UET6 329 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 SCML1Q9UN30 329 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 COQ4Q9Y3A0 265 aa14.81□□□□□ -0.04
HLA-DQB2-229ENST00000411527 A0A1W2PPC4 97 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 EIF4E1BA6NMX2 242 aaKnown RBP14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 O00370 1275 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 PIK3R2O00459 728 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 VILLO15195 856 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 IRAK2O43187 625 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 ACSL4O60488 711 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 RNASEH1O60930 286 aaKnown RBP14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 SIN3BO75182 1162 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 RGS7P49802 495 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 GALCP54803 685 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 TBX4P57082 545 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 KRT85P78386 507 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 LRMPQ12912 555 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 FAM133BQ5BKY9 247 aaKnown RBP14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 NUGGCQ68CJ6 796 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 MSANTD2Q6P1R3 559 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 GATAD2AQ86YP4 633 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 DHX40Q8IX18 779 aaKnown RBP14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 SCUBE3Q8IX30 993 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 ZNF557Q8N988 423 aaPredicted RBP14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 FIBINQ8TAL6 211 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 TTC17Q96AE7 1141 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 MYO19Q96H55 970 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 SLC6A18Q96N87 628 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 IRX2Q9BZI1 471 aaPredicted RBP14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 KIAA1257Q9ULG3 409 aa14.8□□□□□ -0.04
HLA-DQB2-229ENST00000411527 CELSR3Q9NYQ7 3312 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 A0A1B0GTQ1 180 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 PAPSS1O43252 624 aaPredicted RBP14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 GABBR2O75899 941 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 ZNF202O95125 648 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 IGLV3-27P01718 113 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms