RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 ANKRD52Q8NB46 1076 aa14.77□□□□□ -0.04
MINDY4-202ENST00000409881 TIFAQ96CG3 184 aa14.77□□□□□ -0.04
MINDY4-202ENST00000409881 LHX5Q9H2C1 402 aa14.77□□□□□ -0.04
MINDY4-202ENST00000409881 ANAPC5Q9UJX4 755 aa14.77□□□□□ -0.04
MINDY4-202ENST00000409881 LRCH1Q9Y2L9 728 aa14.77□□□□□ -0.04
MINDY4-202ENST00000409881 TCEA3O75764 348 aa14.77□□□□□ -0.05
MINDY4-202ENST00000409881 KRT36O76013 467 aa14.77□□□□□ -0.05
MINDY4-202ENST00000409881 UNGP13051 313 aaPredicted RBP14.77□□□□□ -0.05
MINDY4-202ENST00000409881 IVDP26440 423 aa14.77□□□□□ -0.05
MINDY4-202ENST00000409881 UBE3AQ05086 875 aa14.77□□□□□ -0.05
MINDY4-202ENST00000409881 CUL3Q13618 768 aa14.77□□□□□ -0.05
MINDY4-202ENST00000409881 SLC8B1Q6J4K2 584 aa14.77□□□□□ -0.05
MINDY4-202ENST00000409881 CCNJLQ8IV13 435 aa14.77□□□□□ -0.05
MINDY4-202ENST00000409881 WDTC1Q8N5D0 677 aa14.77□□□□□ -0.05
MINDY4-202ENST00000409881 C10orf82Q8WW14 230 aa14.77□□□□□ -0.05
MINDY4-202ENST00000409881 SMARCD1Q96GM5 515 aa14.77□□□□□ -0.05
MINDY4-202ENST00000409881 SSX2IPQ9Y2D8 614 aa14.77□□□□□ -0.05
MINDY4-202ENST00000409881 NPR3P17342 541 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 PTPN4P29074 926 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 ADCY8P40145 1251 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 GPD2P43304 727 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 CACNA2D1P54289 1103 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 BST2Q10589 180 aaKnown RBP14.76□□□□□ -0.05
MINDY4-202ENST00000409881 GPR17Q13304 367 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 ACAD10Q6JQN1 1059 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 RNF19BQ6ZMZ0 732 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 ATAD1Q8NBU5 361 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 DTX3LQ8TDB6 740 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 DUSP16Q9BY84 665 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.76□□□□□ -0.05
MINDY4-202ENST00000409881 CYTH4Q9UIA0 394 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 ZFP69BQ9UJL9 534 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 PCDHB5Q9Y5E4 795 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 NUMBLQ9Y6R0 609 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 LAMA3Q16787 3333 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 WDR27A2RRH5 827 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 H3BNC9 293 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 TEX28O15482 410 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 EDF1O60869 148 aaKnown RBP14.76□□□□□ -0.05
MINDY4-202ENST00000409881 LMNAP02545 664 aaKnown RBP14.76□□□□□ -0.05
MINDY4-202ENST00000409881 GZMAP12544 262 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 ATF2P15336 505 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 CYP2F1P24903 491 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 RANBP1P43487 201 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 RGS7P49802 495 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 MAP3K7CLP57077 242 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 SMAD3P84022 425 aaKnown RBP14.76□□□□□ -0.05
MINDY4-202ENST00000409881 CREMQ03060 361 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 CENPCQ03188 943 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 PKDCCQ504Y2 493 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 C2CD6Q53TS8 623 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 ARHGAP22Q7Z5H3 698 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 MTDHQ86UE4 582 aaKnown RBP14.76□□□□□ -0.05
MINDY4-202ENST00000409881 ITFG2Q969R8 447 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 C11orf70Q9BRQ4 267 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 NUP85Q9BW27 656 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 ADAM33Q9BZ11 813 aa14.76□□□□□ -0.05
MINDY4-202ENST00000409881 MTMR11A4FU01 709 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 LILRB3O75022 631 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 BEST1O76090 585 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 CNPP09543 421 aaKnown RBP14.75□□□□□ -0.05
MINDY4-202ENST00000409881 SETSIPP0DME0 302 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 CDH5P33151 784 aaPredicted RBP14.75□□□□□ -0.05
MINDY4-202ENST00000409881 CLEC20AQ6ZU45 233 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 C4orf33Q8N1A6 199 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 ZNF564Q8TBZ8 553 aaPredicted RBP14.75□□□□□ -0.05
MINDY4-202ENST00000409881 GDPD5Q8WTR4 605 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 MAML1Q92585 1016 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 FAM118BQ9BPY3 351 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 CADM1Q9BY67 442 aaKnown RBP14.75□□□□□ -0.05
MINDY4-202ENST00000409881 SYNCQ9H7C4 482 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 TMEM30AQ9NV96 361 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 HIDE1A8MVS5 230 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 PIK3R2O00459 728 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 TRAFD1O14545 582 aaPredicted RBP14.75□□□□□ -0.05
MINDY4-202ENST00000409881 CAPN9O14815 690 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 LPXNO60711 386 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 IRS1P35568 1242 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 NDUFV1P49821 464 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 SPARCL1Q14515 664 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 KPNB1Q14974 876 aaKnown RBP14.75□□□□□ -0.05
MINDY4-202ENST00000409881 NLRP9Q7RTR0 991 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 SCN4BQ8IWT1 228 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 GPR65Q8IYL9 337 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 TTC9BQ8N6N2 239 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 TRAPPC9Q96Q05 1148 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 KCNK16Q96T55 309 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 SMOQ99835 787 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 CCDC77Q9BR77 488 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 NPHS2Q9NP85 383 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 EURLQ9NYK6 297 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 COLQQ9Y215 455 aaPredicted RBP14.75□□□□□ -0.05
MINDY4-202ENST00000409881 SLC27A5Q9Y2P5 690 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 ACTL7BQ9Y614 415 aa14.75□□□□□ -0.05
MINDY4-202ENST00000409881 RPA3P35244 121 aaPredicted RBP14.74□□□□□ -0.05
MINDY4-202ENST00000409881 GRIK1P39086 918 aa14.74□□□□□ -0.05
MINDY4-202ENST00000409881 SERPINB4P48594 390 aa14.74□□□□□ -0.05
MINDY4-202ENST00000409881 CAMK1Q14012 370 aa14.74□□□□□ -0.05
MINDY4-202ENST00000409881 ACSBG2Q5FVE4 666 aa14.74□□□□□ -0.05
MINDY4-202ENST00000409881 PMF1Q6P1K2 205 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms