RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 TKTL2Q9H0I9 626 aa20.72■□□□□ 0.91
USP39-204ENST00000409766 SMYD2Q9NRG4 433 aa20.72■□□□□ 0.91
USP39-204ENST00000409766 CAPN7Q9Y6W3 813 aa20.72■□□□□ 0.91
USP39-204ENST00000409766 FAM155BO75949 473 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 GLB1LQ6UWU2 654 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 BEND5Q7L4P6 421 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 ZNF280BQ86YH2 543 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 CTAGE3PQ8IX95 158 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 REM2Q8IYK8 340 aaPredicted RBP20.71■□□□□ 0.91
USP39-204ENST00000409766 SCAMP5Q8TAC9 235 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 GSDMBQ8TAX9 411 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 SPOCK2Q92563 424 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 SEPT10Q9P0V9 454 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 OR12D3Q9UGF7 316 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 PCDHB8Q9UN66 801 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 F5H423 210 aaPredicted RBP20.71■□□□□ 0.91
USP39-204ENST00000409766 DDHD2O94830 711 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 HOXD10P28358 340 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 ZNF135P52742 658 aaPredicted RBP20.71■□□□□ 0.91
USP39-204ENST00000409766 YWHAHQ04917 246 aaPredicted RBP20.71■□□□□ 0.91
USP39-204ENST00000409766 SLC18A2Q05940 514 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 DSC1Q08554 894 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 DNAJC3Q13217 504 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 TTC39BQ5VTQ0 682 aaPredicted RBP20.71■□□□□ 0.91
USP39-204ENST00000409766 LRRC8BQ6P9F7 803 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 FAM47EQ6ZV65 393 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 NPWQ8N729 165 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 CD99L2Q8TCZ2 262 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 LINC01599Q8WXQ3 324 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 CREBZFQ9NS37 354 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 IGSF9Q9P2J2 1179 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 ARL2BPQ9Y2Y0 163 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 PCDHA11Q9Y5I1 949 aa20.71■□□□□ 0.91
USP39-204ENST00000409766 NCAM2O15394 837 aa20.7■□□□□ 0.9
USP39-204ENST00000409766 ZNF189O75820 626 aaPredicted RBP20.7■□□□□ 0.9
USP39-204ENST00000409766 IGLV3-25P01717 112 aa20.7■□□□□ 0.9
USP39-204ENST00000409766 ADRA1DP25100 572 aa20.7■□□□□ 0.9
USP39-204ENST00000409766 PSMB4P28070 264 aa20.7■□□□□ 0.9
USP39-204ENST00000409766 FAM189BP81408 668 aa20.7■□□□□ 0.9
USP39-204ENST00000409766 EIF4EBP2Q13542 120 aaPredicted RBP20.7■□□□□ 0.9
USP39-204ENST00000409766 CLLU1OSQ5K130 101 aa20.7■□□□□ 0.9
USP39-204ENST00000409766 TRMT10BQ6PF06 316 aaKnown RBP20.7■□□□□ 0.9
USP39-204ENST00000409766 DQX1Q8TE96 717 aaKnown RBP20.7■□□□□ 0.9
USP39-204ENST00000409766 FAM159BA6NKW6 160 aa20.7■□□□□ 0.9
USP39-204ENST00000409766 SCTRP47872 440 aa20.7■□□□□ 0.9
USP39-204ENST00000409766 PPIDQ08752 370 aaKnown RBP20.7■□□□□ 0.9
USP39-204ENST00000409766 CYS1Q717R9 158 aa20.7■□□□□ 0.9
USP39-204ENST00000409766 ZNF276Q8N554 614 aa20.7■□□□□ 0.9
USP39-204ENST00000409766 LRRC8CQ8TDW0 803 aa20.7■□□□□ 0.9
USP39-204ENST00000409766 EPAS1Q99814 870 aa20.7■□□□□ 0.9
USP39-204ENST00000409766 TSEN34Q9BSV6 310 aaKnown RBP20.7■□□□□ 0.9
USP39-204ENST00000409766 TRIM62Q9BVG3 475 aa20.7■□□□□ 0.9
USP39-204ENST00000409766 ABCF3Q9NUQ8 709 aa20.7■□□□□ 0.9
USP39-204ENST00000409766 MOCS1Q9NZB8 636 aa20.7■□□□□ 0.9
USP39-204ENST00000409766 SLC17A7Q9P2U7 560 aa20.7■□□□□ 0.9
USP39-204ENST00000409766 STARD13Q9Y3M8 1113 aa20.7■□□□□ 0.9
USP39-204ENST00000409766 SNX10Q9Y5X0 201 aa20.7■□□□□ 0.9
USP39-204ENST00000409766 NUP205Q92621 2012 aa20.69■□□□□ 0.9
USP39-204ENST00000409766 KCNK1O00180 336 aa20.69■□□□□ 0.9
USP39-204ENST00000409766 TNFRSF10BO14763 440 aa20.69■□□□□ 0.9
USP39-204ENST00000409766 LRIG2O94898 1065 aa20.69■□□□□ 0.9
USP39-204ENST00000409766 STEAP4Q687X5 459 aa20.69■□□□□ 0.9
USP39-204ENST00000409766 C4orf50Q6ZRC1 276 aa20.69■□□□□ 0.9
USP39-204ENST00000409766 SPATA2LQ8IUW3 424 aaPredicted RBP20.69■□□□□ 0.9
USP39-204ENST00000409766 SLC43A3Q8NBI5 491 aa20.69■□□□□ 0.9
USP39-204ENST00000409766 STAMBPL1Q96FJ0 436 aa20.69■□□□□ 0.9
USP39-204ENST00000409766 PLCD4Q9BRC7 762 aa20.69■□□□□ 0.9
USP39-204ENST00000409766 SLCO1B3Q9NPD5 702 aa20.69■□□□□ 0.9
USP39-204ENST00000409766 PHTF1Q9UMS5 762 aa20.69■□□□□ 0.9
USP39-204ENST00000409766 SDR42E2A6NKP2 422 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 LPXNO60711 386 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 KRT37O76014 449 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 SNRPAP09012 282 aaKnown RBP20.68■□□□□ 0.9
USP39-204ENST00000409766 CSH1P0DML2 217 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 CSH2P0DML3 217 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 PYGBP11216 843 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 PTPN3P26045 913 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 NEK3P51956 506 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 SLC5A3P53794 718 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 SEPT7Q16181 437 aaKnown RBP20.68■□□□□ 0.9
USP39-204ENST00000409766 NOMO2Q5JPE7 1267 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 LHX8Q68G74 356 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 PID1Q7Z2X4 250 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 RAET1EQ8TD07 263 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 PXYLP1Q8TE99 480 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 ZNF75CPQ92670 426 aaPredicted RBP20.68■□□□□ 0.9
USP39-204ENST00000409766 OXNAD1Q96HP4 312 aaPredicted RBP20.68■□□□□ 0.9
USP39-204ENST00000409766 APOPT1Q96IL0 206 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 CFHR5Q9BXR6 569 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 BRD8Q9H0E9 1235 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 C12orf65Q9H3J6 166 aaKnown RBP20.68■□□□□ 0.9
USP39-204ENST00000409766 A0A1W2PQ45 241 aaPredicted RBP20.68■□□□□ 0.9
USP39-204ENST00000409766 A0A1W2PQY0 241 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 WDR27A2RRH5 827 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 TRIM49D1C9J1S8 452 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 TMEM189-UBE2V1I3L0A0 370 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 UGT1A9O60656 530 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 EDF1O60869 148 aaKnown RBP20.68■□□□□ 0.9
USP39-204ENST00000409766 ALDH1A2O94788 518 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 EPHB2P29323 1055 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms