RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 CYP2S1Q96SQ9 504 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 FMO2Q99518 471 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 LGMNQ99538 433 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 PBX4Q9BYU1 374 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 RNF38Q9H0F5 515 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 NKX2-4Q9H2Z4 354 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 GKN1Q9NS71 199 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 SMPD4Q9NXE4 827 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 MPP6Q9NZW5 540 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 SLC12A6Q9UHW9 1150 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 PCDHA11Q9Y5I1 949 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 RANBP2P49792 3224 aaKnown RBP12.84□□□□□ -0.35
CHMP3-204ENST00000409727 GOLGA6L7A0A1B0GV03 622 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 SCAMP3O14828 347 aaKnown RBP12.84□□□□□ -0.35
CHMP3-204ENST00000409727 RFPL2O75678 378 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 SASH3O75995 380 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 RB1P06400 928 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 EPCAMP16422 314 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 GJA1P17302 382 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 IVDP26440 423 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 GABRR2P28476 465 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 HCAR3P49019 387 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 DRG2P55039 364 aaKnown RBP12.84□□□□□ -0.35
CHMP3-204ENST00000409727 CYP4F8P98187 520 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 AP1B1Q10567 949 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 NNTQ13423 1086 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 CASP8Q14790 479 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 SNX30Q5VWJ9 437 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 IZUMO3Q5VZ72 239 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 EMBQ6PCB8 327 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 CDKL3Q8IVW4 592 aaPredicted RBP12.84□□□□□ -0.35
CHMP3-204ENST00000409727 ARNTL2Q8WYA1 636 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 TBC1D31Q96DN5 1066 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 BTN2A3PQ96KV6 586 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 CORO1BQ9BR76 489 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 PCDH9Q9HC56 1237 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 MAN1C1Q9NR34 630 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 ZDHHC18Q9NUE0 388 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 HCFC1R1Q9NWW0 138 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 LAMA3Q16787 3333 aa12.84□□□□□ -0.35
CHMP3-204ENST00000409727 CEP290O15078 2479 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 IGLV3-27P01718 113 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 F11P03951 625 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 MYL4P12829 197 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 IRAK1P51617 712 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 MLLT6P55198 1093 aaPredicted RBP12.83□□□□□ -0.36
CHMP3-204ENST00000409727 AUHQ13825 339 aaKnown RBP12.83□□□□□ -0.36
CHMP3-204ENST00000409727 PAFAH1B3Q15102 231 aaKnown RBP12.83□□□□□ -0.36
CHMP3-204ENST00000409727 SLC45A4Q5BKX6 768 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 SYCP2LQ5T4T6 812 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 ZNF697Q5TEC3 545 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 PPP2R2DQ66LE6 453 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 HDXQ7Z353 690 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 ARL14EPQ8N8R7 260 aaPredicted RBP12.83□□□□□ -0.36
CHMP3-204ENST00000409727 CCHCR1Q8TD31 782 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 TFB1MQ8WVM0 346 aaKnown RBP12.83□□□□□ -0.36
CHMP3-204ENST00000409727 ART4Q93070 314 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 SLC22A12Q96S37 553 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 FUT8Q9BYC5 575 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 IL21Q9HBE4 155 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 USP29Q9HBJ7 922 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 DNAJC17Q9NVM6 304 aaKnown RBP12.83□□□□□ -0.36
CHMP3-204ENST00000409727 SEPT10Q9P0V9 454 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 WHRNQ9P202 907 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 ANAPC5Q9UJX4 755 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 NEU3Q9UQ49 428 aa12.83□□□□□ -0.36
CHMP3-204ENST00000409727 A0A1W2PRU2 124 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 H0YGN5 161 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 H3BNC9 293 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 CLASP2O75122 1294 aaKnown RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 OAS1P00973 400 aaKnown RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 MBL2P11226 248 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 VAV1P15498 845 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 ITIH2P19823 946 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 RPL22P35268 128 aaKnown RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 PPP3CCP48454 512 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 KPNA1P52294 538 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 ERVK-21P61565 698 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 NUGGCQ68CJ6 796 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 HEATR6Q6AI08 1181 aaKnown RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 GAREM2Q75VX8 874 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 PDZD4Q76G19 769 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 BZW1Q7L1Q6 419 aaKnown RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 TFAP2DQ7Z6R9 452 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 CCDC25Q86WR0 208 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 CHSY1Q86X52 802 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 DENND1CQ8IV53 801 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 GDPD5Q8WTR4 605 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 DEPDC1BQ8WUY9 529 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 CAVIN3Q969G5 261 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 PWWP2AQ96N64 755 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 OLFM3Q96PB7 478 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 QKIQ96PU8 341 aaKnown RBP eCLIP12.82□□□□□ -0.362e-7■■■■□ 25.7
CHMP3-204ENST00000409727 CEP41Q9BYV8 373 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 ATXN3LQ9H3M9 355 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 HBS1LQ9Y450 684 aaKnown RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 ASB3Q9Y575 518 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 MYO7AQ13402 2215 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 CDH23Q9H251 3354 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 BCLAF3A2AJT9 711 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms