RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 HPS6Q86YV9 775 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 PARP8Q8N3A8 854 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 SOCS4Q8WXH5 440 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 MTMR8Q96EF0 704 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 SLC9A7Q96T83 725 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 GRIP2Q9C0E4 1043 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 SUCOQ9UBS9 1254 aaKnown RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 LACTBL1A8MY62 500 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 MED24O75448 989 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 GJB6O95452 261 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 ABCG1P45844 678 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 STAT4Q14765 748 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 TTC23Q5W5X9 447 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 USP45Q70EL2 814 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 SETD6Q8TBK2 473 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 DPF2Q92785 391 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 CDADC1Q9BWV3 514 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 FBXO44Q9H4M3 255 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 CISHQ9NSE2 258 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 TOR4AQ9NXH8 423 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 TAF6LQ9Y6J9 622 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 FARP2O94887 1054 aaPredicted RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 SARSP49591 514 aaKnown RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 GEMIN4P57678 1058 aaKnown RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 EMBQ6PCB8 327 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 SPATA21Q7Z572 469 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 TDRD5Q8NAT2 981 aaKnown RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 AGO4Q9HCK5 861 aaKnown RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 IMP3Q9NV31 184 aaKnown RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 BTN3A1O00481 513 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 IDH3BO43837 385 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 BMP10O95393 424 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 DNTTP04053 509 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 AMPD1P23109 780 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 NAMPTP43490 491 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 DDR2Q16832 855 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 RPTNQ6XPR3 784 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 SETD7Q8WTS6 366 aaKnown RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 SLC20A1Q8WUM9 679 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 KCNB2Q92953 911 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 ZBTB45Q96K62 511 aaPredicted RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 KCTD14Q9BQ13 255 aaPredicted RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 ATG10Q9H0Y0 220 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 FANCEQ9HB96 536 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 RIMS1Q86UR5 1692 aaKnown RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 ATP5HO75947 161 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 RPL4P36578 427 aaKnown RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 GPR15P49685 360 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 IL5RAQ01344 420 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 TRIP10Q15642 601 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 CARTPTQ16568 116 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 SPATA4Q8NEY3 305 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 SLC2A14Q8TDB8 520 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 C10orf88Q9H8K7 445 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 TSPAN16Q9UKR8 245 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 GJB1P08034 283 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 PDHA2P29803 388 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 CRATP43155 626 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 CTSOP43234 321 aaPredicted RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 TBX2Q13207 712 aaPredicted RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 METTL7BQ6UX53 244 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 ZNF579Q8NAF0 562 aaKnown RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 E2F7Q96AV8 911 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 ELOVL2Q9NXB9 296 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 FAM187AA6NFU0 413 aa8.59□□□□□ -1.04
SCN9A-203ENST00000409672 CYP2A6P11509 494 aaPredicted RBP8.59□□□□□ -1.04
SCN9A-203ENST00000409672 PROSER1Q86XN7 944 aa8.59□□□□□ -1.04
SCN9A-203ENST00000409672 OR14C36Q8NHC7 312 aa8.59□□□□□ -1.04
SCN9A-203ENST00000409672 MKNK1Q9BUB5 465 aa8.59□□□□□ -1.04
SCN9A-203ENST00000409672 CCDC144BQ3MJ40 725 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 AASDHQ4L235 1098 aaPredicted RBP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 MFSD7Q6UXD7 560 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 C12orf50Q8NA57 414 aaPredicted RBP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 C19orf18Q8NEA5 215 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 AGPAT3Q9NRZ7 376 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 STOML1Q9UBI4 398 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 MCIDASD6RGH6 385 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 CD52P31358 61 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 PKN1Q16512 942 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 TBC1D25Q3MII6 688 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 STOX1Q6ZVD7 989 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 ADGRG2Q8IZP9 1017 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 ZNF563Q8TA94 476 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 WRAP53Q9BUR4 548 aaKnown RBP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 TMPRSS4Q9NRS4 437 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 ZBTB14O43829 449 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 FGFR3P22607 806 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 PSMA4P25789 261 aaKnown RBP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 RPA3P35244 121 aaPredicted RBP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 CRADDP78560 199 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 GALNT3Q14435 633 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 CBWD6Q4V339 395 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 TFDP3Q5H9I0 405 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 USP49Q70CQ1 688 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 PPIL6Q8IXY8 311 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 TSPAN14Q8NG11 270 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 SMARCD1Q96GM5 515 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 PPP1R16AQ96I34 528 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 NARS2Q96I59 477 aaKnown RBP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 LMLNQ96KR4 655 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms