RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 HNRNPH3P31942 346 aaKnown RBP11.72□□□□□ -0.53
SNX13-202ENST00000409604 MICALCLQ6ZW33 695 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 PRELID2Q8N945 189 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 OR10T2Q8NGX3 314 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 TTC1Q99614 292 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 TSEN34Q9BSV6 310 aaKnown RBP11.72□□□□□ -0.53
SNX13-202ENST00000409604 CPSF2Q9P2I0 782 aaKnown RBP11.72□□□□□ -0.53
SNX13-202ENST00000409604 PAMP19021 973 aa11.71□□□□□ -0.53
SNX13-202ENST00000409604 ADRA1BP35368 520 aa11.71□□□□□ -0.53
SNX13-202ENST00000409604 USP10Q14694 798 aaKnown RBP11.71□□□□□ -0.53
SNX13-202ENST00000409604 PABPC1LQ4VXU2 614 aaKnown RBP11.71□□□□□ -0.53
SNX13-202ENST00000409604 MON1BQ7L1V2 547 aa11.71□□□□□ -0.53
SNX13-202ENST00000409604 GRASPQ7Z6J2 395 aaPredicted RBP11.71□□□□□ -0.53
SNX13-202ENST00000409604 TDRD5Q8NAT2 981 aaKnown RBP11.71□□□□□ -0.53
SNX13-202ENST00000409604 OR7D4Q8NG98 312 aa11.71□□□□□ -0.53
SNX13-202ENST00000409604 ZIM3Q96PE6 472 aa11.71□□□□□ -0.53
SNX13-202ENST00000409604 FBXL21Q9UKT6 434 aa11.71□□□□□ -0.53
SNX13-202ENST00000409604 STK38LQ9Y2H1 464 aa11.71□□□□□ -0.53
SNX13-202ENST00000409604 LAMB2P55268 1798 aa11.71□□□□□ -0.53
SNX13-202ENST00000409604 A0A0A6YYK5 440 aaPredicted RBP11.71□□□□□ -0.53
SNX13-202ENST00000409604 A0A0G2JND7 137 aa11.71□□□□□ -0.53
SNX13-202ENST00000409604 PJA2O43164 708 aa11.71□□□□□ -0.53
SNX13-202ENST00000409604 NDUFS3O75489 264 aa11.71□□□□□ -0.53
SNX13-202ENST00000409604 ITIH2P19823 946 aa11.71□□□□□ -0.53
SNX13-202ENST00000409604 NUDT18Q6ZVK8 323 aa11.71□□□□□ -0.53
SNX13-202ENST00000409604 CNTN3Q9P232 1028 aa11.71□□□□□ -0.53
SNX13-202ENST00000409604 DERAQ9Y315 318 aa11.71□□□□□ -0.53
SNX13-202ENST00000409604 TRAV19A0A0A6YYK7 116 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 LZTS3O60299 673 aaPredicted RBP11.71□□□□□ -0.54
SNX13-202ENST00000409604 KRT38O76015 456 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 CTPS1P17812 591 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 CLLU1OSQ5K130 101 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 CHPFQ8IZ52 775 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 SLC25A13Q9UJS0 675 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 IQANK1A0A1B0GTG1 560 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 NCF1BA6NI72 391 aaPredicted RBP11.71□□□□□ -0.54
SNX13-202ENST00000409604 NCF1CA8MVU1 366 aaPredicted RBP11.71□□□□□ -0.54
SNX13-202ENST00000409604 GPC4O75487 556 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 F7P08709 466 aaPredicted RBP11.71□□□□□ -0.54
SNX13-202ENST00000409604 NCF1P14598 390 aaPredicted RBP11.71□□□□□ -0.54
SNX13-202ENST00000409604 MGAT1P26572 445 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 STIP1P31948 543 aaKnown RBP11.71□□□□□ -0.54
SNX13-202ENST00000409604 NTHL1P78549 312 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 FAM187BQ17R55 369 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 MAP7D1Q3KQU3 841 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 TAS1R1Q7RTX1 841 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 PPHLN1Q8NEY8 458 aaKnown RBP11.71□□□□□ -0.54
SNX13-202ENST00000409604 STAMBPL1Q96FJ0 436 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 CHMP6Q96FZ7 201 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 RNF157Q96PX1 679 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 HNRNPABQ99729 332 aaKnown RBP11.71□□□□□ -0.54
SNX13-202ENST00000409604 SMOQ99835 787 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 ELAC2Q9BQ52 826 aaKnown RBP11.71□□□□□ -0.54
SNX13-202ENST00000409604 ZDHHC6Q9H6R6 413 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 SCUBE2Q9NQ36 999 aa11.71□□□□□ -0.54
SNX13-202ENST00000409604 NCOR1O75376 2440 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 A0A087WUV0 522 aaPredicted RBP11.7□□□□□ -0.54
SNX13-202ENST00000409604 ABHD14A-ACY1A0A1B0GW23 586 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 MBLAC1A4D2B0 266 aaPredicted RBP11.7□□□□□ -0.54
SNX13-202ENST00000409604 ELK3P41970 407 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 KDSRQ06136 332 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 UBXN11Q5T124 520 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 FRA10AC1Q70Z53 315 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 SDCCAG8Q86SQ7 713 aaPredicted RBP11.7□□□□□ -0.54
SNX13-202ENST00000409604 OR52K1Q8NGK4 314 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 LMO3Q8TAP4 145 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 FAM71BQ8TC56 605 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 BORCS6Q96GS4 357 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 ELMO2Q96JJ3 720 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 GTSE1Q9NYZ3 720 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 PCDHB8Q9UN66 801 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 LAMA4Q16363 1823 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 TARSL2A2RTX5 802 aaKnown RBP11.7□□□□□ -0.54
SNX13-202ENST00000409604 LRIG2O94898 1065 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 MYBL2P10244 700 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 CD86P42081 329 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 OGDHQ02218 1023 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 FNDC3BQ53EP0 1204 aaKnown RBP11.7□□□□□ -0.54
SNX13-202ENST00000409604 RFX8Q6ZV50 586 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 MARK2Q7KZI7 788 aaKnown RBP11.7□□□□□ -0.54
SNX13-202ENST00000409604 PPIL6Q8IXY8 311 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 L2HGDHQ9H9P8 463 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 PCDH18Q9HCL0 1135 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 IARS2Q9NSE4 1012 aaKnown RBP11.7□□□□□ -0.54
SNX13-202ENST00000409604 CASP8AP2Q9UKL3 1982 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 AXIN1O15169 862 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 DAOAP59103 153 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 IL9RQ01113 521 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 COL9A2Q14055 689 aaPredicted RBP11.7□□□□□ -0.54
SNX13-202ENST00000409604 CCNG2Q16589 344 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 TAF1BQ53T94 588 aaPredicted RBP11.7□□□□□ -0.54
SNX13-202ENST00000409604 HSP90AA5PQ58FG0 334 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 SDE2Q6IQ49 451 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 GPRIN1Q7Z2K8 1008 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 PBXIP1Q96AQ6 731 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 TNKS2Q9H2K2 1166 aa11.7□□□□□ -0.54
SNX13-202ENST00000409604 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.7□□□□□ -0.54
SNX13-202ENST00000409604 RBM47A0AV96 593 aaKnown RBP11.69□□□□□ -0.54
SNX13-202ENST00000409604 WDR27A2RRH5 827 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 VAPBO95292 243 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms