RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 SPATA31C2B4DYI2 1134 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 NDUFB5O43674 189 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 CYP3A7P24462 503 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 MIPP30301 263 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 CORO1BQ9BR76 489 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 LACRTQ9GZZ8 138 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 NPR3P17342 541 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 PSEN1P49768 467 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 PDPK2PQ6A1A2 396 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 AKAP7Q9P0M2 348 aaPredicted RBP25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 WDR27A2RRH5 827 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 CCT8L1PA6NM43 557 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 CSH1P0DML2 217 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 CSH2P0DML3 217 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 PPM1AP35813 382 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 NME5P56597 212 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 TRIM69Q86WT6 500 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 SH3GL1Q99961 368 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 OMDQ99983 421 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 IMPAD1Q9NX62 359 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 NUDT5Q9UKK9 219 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 DNAJC16Q9Y2G8 782 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 TMEM114B3SHH9 223 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 MEIS2O14770 477 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 TFE3P19532 575 aaPredicted RBP25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 HNRNPLLQ8WVV9 542 aaKnown RBP25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 RPL9P32969 192 aaKnown RBP25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 CYLC2Q14093 348 aaPredicted RBP25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 PLEKHM3Q6ZWE6 761 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 POLG2Q9UHN1 485 aa25.62■■□□□ 1.69
SPIRE1-202ENST00000409402 CRABP2P29373 138 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 DAB2IPQ5VWQ8 1189 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 FBXO25Q8TCJ0 367 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 PCDHA3Q9Y5H8 950 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 NFICP08651 508 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 BTNL9Q6UXG8 535 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 TDRD5Q8NAT2 981 aaKnown RBP25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 NMRAL1Q9HBL8 299 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 RNF19AQ9NV58 838 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 ST3GAL5Q9UNP4 418 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 MGAT1P26572 445 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 CD52P31358 61 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 PTENP60484 403 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 GTF2BQ00403 316 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 RUNX1T1Q06455 604 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 NT5DC1Q5TFE4 455 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 NKX2-3Q8TAU0 364 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 PPP1R13LQ8WUF5 828 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 ALBP02768 609 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 HDCP19113 662 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 THOP1P52888 689 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 PURBQ96QR8 312 aaKnown RBP25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 HEY2Q9UBP5 337 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 SNTNA6NMZ2 147 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 GP5P40197 560 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 SARSP49591 514 aaKnown RBP25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 BMPR2Q13873 1038 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 NR6A1Q15406 480 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 CBWD6Q4V339 395 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 KCNK18Q7Z418 384 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 DNAAF5Q86Y56 855 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 REPS1Q96D71 796 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 KLRG1Q96E93 195 aa25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.61■■□□□ 1.69
SPIRE1-202ENST00000409402 TM9SF1O15321 606 aa25.6■■□□□ 1.69
SPIRE1-202ENST00000409402 REM2Q8IYK8 340 aaPredicted RBP25.6■■□□□ 1.69
SPIRE1-202ENST00000409402 ACO2Q99798 780 aaKnown RBP25.6■■□□□ 1.69
SPIRE1-202ENST00000409402 EXOSC4Q9NPD3 245 aaKnown RBP25.6■■□□□ 1.69
SPIRE1-202ENST00000409402 EVA1BQ9NVM1 165 aa25.6■■□□□ 1.69
SPIRE1-202ENST00000409402 HES2Q9Y543 173 aa25.6■■□□□ 1.69
SPIRE1-202ENST00000409402 DUSP9Q99956 384 aaKnown RBP25.6■■□□□ 1.69
SPIRE1-202ENST00000409402 GIT1Q9Y2X7 761 aa25.6■■□□□ 1.69
SPIRE1-202ENST00000409402 WTIPA6NIX2 430 aaPredicted RBP25.6■■□□□ 1.69
SPIRE1-202ENST00000409402 WDR47O94967 919 aa25.6■■□□□ 1.69
SPIRE1-202ENST00000409402 RGL4Q8IZJ4 473 aa25.6■■□□□ 1.69
SPIRE1-202ENST00000409402 NDUFS2O75306 463 aa25.6■■□□□ 1.69
SPIRE1-202ENST00000409402 MAD2L1Q13257 205 aaPredicted RBP25.6■■□□□ 1.69
SPIRE1-202ENST00000409402 WDR59Q6PJI9 974 aa25.6■■□□□ 1.69
SPIRE1-202ENST00000409402 ANKRD23Q86SG2 305 aa25.6■■□□□ 1.69
SPIRE1-202ENST00000409402 CXorf40AQ8TE69 158 aa25.6■■□□□ 1.69
SPIRE1-202ENST00000409402 KCNK1O00180 336 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 S100A5P33763 92 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 CHRNB3Q05901 458 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 SLC45A4Q5BKX6 768 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 ZNF470Q6ECI4 717 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 KCNT2Q6UVM3 1135 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 LRRC34Q8IZ02 419 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 FBXO39Q8N4B4 442 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 CPNE1Q99829 537 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 NR5A2O00482 541 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 DNALI1O14645 258 aaPredicted RBP25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 SLC2A4P14672 509 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 CHKAP35790 457 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 ALDH9A1P49189 494 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 SEC24CP53992 1094 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 CNGA2Q16280 664 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 DEFB118Q96PH6 123 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 TISP43B9A030 160 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 FLT3LGP49771 235 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms