RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 CSF1P09603 554 aa7.04□□□□□ -1.28
PTPN12-202ENST00000407343 CYP2A6P11509 494 aaPredicted RBP7.04□□□□□ -1.28
PTPN12-202ENST00000407343 SLC8A1P32418 973 aa7.04□□□□□ -1.28
PTPN12-202ENST00000407343 MCM2P49736 904 aa7.04□□□□□ -1.28
PTPN12-202ENST00000407343 SLC37A1P57057 533 aa7.04□□□□□ -1.28
PTPN12-202ENST00000407343 NHLH1Q02575 133 aa7.04□□□□□ -1.28
PTPN12-202ENST00000407343 RNASELQ05823 741 aaKnown RBP7.04□□□□□ -1.28
PTPN12-202ENST00000407343 HSP90AB4PQ58FF6 505 aa7.04□□□□□ -1.28
PTPN12-202ENST00000407343 ZNF484Q5JVG2 852 aa7.04□□□□□ -1.28
PTPN12-202ENST00000407343 PRAMEF17Q5VTA0 474 aa7.04□□□□□ -1.28
PTPN12-202ENST00000407343 SERPINA13PQ6UXR4 307 aa7.04□□□□□ -1.28
PTPN12-202ENST00000407343 SLC39A5Q6ZMH5 540 aa7.04□□□□□ -1.28
PTPN12-202ENST00000407343 PTGR2Q8N8N7 351 aaPredicted RBP7.04□□□□□ -1.28
PTPN12-202ENST00000407343 GOLGA1Q92805 767 aa7.04□□□□□ -1.28
PTPN12-202ENST00000407343 TRIM63Q969Q1 353 aa7.04□□□□□ -1.28
PTPN12-202ENST00000407343 COG8Q96MW5 612 aa7.04□□□□□ -1.28
PTPN12-202ENST00000407343 GPR78Q96P69 363 aa7.04□□□□□ -1.28
PTPN12-202ENST00000407343 ASNSD1Q9NWL6 643 aa7.04□□□□□ -1.28
PTPN12-202ENST00000407343 PDP2Q9P2J9 529 aa7.04□□□□□ -1.28
PTPN12-202ENST00000407343 ZNHIT2Q9UHR6 403 aa7.04□□□□□ -1.28
PTPN12-202ENST00000407343 GTF2A1LQ9UNN4 478 aa7.04□□□□□ -1.28
PTPN12-202ENST00000407343 TBC1D3DA0A087WVF3 549 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 TBC1D3IA0A087WXS9 549 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 TBC1D3EA0A087X179 549 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 TBC1D3KA0A087X1G2 549 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 TBC1D3BA6NDS4 549 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 TBC1D3FA6NER0 549 aaPredicted RBP7.03□□□□□ -1.28
PTPN12-202ENST00000407343 C3orf70A6NLC5 250 aaPredicted RBP7.03□□□□□ -1.28
PTPN12-202ENST00000407343 TBC1D3LB9A6J9 549 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 TBC1D3HP0C7X1 549 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 ACP5P13686 325 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 CHN1P15882 459 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 MAPK9P45984 424 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 KPNB1Q14974 876 aaKnown RBP7.03□□□□□ -1.28
PTPN12-202ENST00000407343 TBC1D3GQ6DHY5 549 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 TBC1D3CQ6IPX1 549 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 VSTM1Q6UX27 236 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 RANBP10Q6VN20 620 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 ZNF788Q6ZQV5 615 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 RINLQ6ZS11 566 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 RTL10Q7L3V2 364 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 TBC1D3Q8IZP1 549 aaPredicted RBP7.03□□□□□ -1.28
PTPN12-202ENST00000407343 IL17REQ8NFR9 667 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 DPF1Q92782 380 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 RMI1Q9H9A7 625 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 RIC8AQ9NPQ8 531 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 DNAJC16Q9Y2G8 782 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 DERAQ9Y315 318 aa7.03□□□□□ -1.28
PTPN12-202ENST00000407343 SPATA31A5Q5VU36 1347 aa7.02□□□□□ -1.28
PTPN12-202ENST00000407343 SPATA31A6Q5VVP1 1343 aa7.02□□□□□ -1.28
PTPN12-202ENST00000407343 SPATA31A7Q8IWB4 1347 aa7.02□□□□□ -1.28
PTPN12-202ENST00000407343 LINC01548A6NM66 108 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 STX16-NPEPL1H3BU86 382 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 EYA2O00167 538 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 STX16O14662 325 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 ALDOAP04075 364 aaKnown RBP7.02□□□□□ -1.29
PTPN12-202ENST00000407343 PYGLP06737 847 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 RXRAP19793 462 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 BMP5P22003 454 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 PAX3P23760 479 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 PAPOLAP51003 745 aaKnown RBP7.02□□□□□ -1.29
PTPN12-202ENST00000407343 SHC2P98077 582 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 SUMO4Q6EEV6 95 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 ZNF782Q6ZMW2 699 aaPredicted RBP7.02□□□□□ -1.29
PTPN12-202ENST00000407343 BBS12Q6ZW61 710 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 TMTC1Q8IUR5 882 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 TMEM57Q8N5G2 664 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 PNLDC1Q8NA58 520 aaKnown RBP7.02□□□□□ -1.29
PTPN12-202ENST00000407343 C8orf58Q8NAV2 365 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 CEP70Q8NHQ1 597 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 ATP2A3Q93084 1043 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 ASB2Q96Q27 587 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 TMLHEQ9NVH6 421 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 TMEM160Q9NX00 188 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 MTMR4Q9NYA4 1195 aa7.02□□□□□ -1.29
PTPN12-202ENST00000407343 RRN3P2A6NIE6 340 aa7.01□□□□□ -1.29
PTPN12-202ENST00000407343 PRRT4C9JH25 899 aa7.01□□□□□ -1.29
PTPN12-202ENST00000407343 GRM8O00222 908 aa7.01□□□□□ -1.29
PTPN12-202ENST00000407343 CNTN5O94779 1100 aa7.01□□□□□ -1.29
PTPN12-202ENST00000407343 POLBP06746 335 aa7.01□□□□□ -1.29
PTPN12-202ENST00000407343 SOX2P48431 317 aa7.01□□□□□ -1.29
PTPN12-202ENST00000407343 VPS41P49754 854 aa7.01□□□□□ -1.29
PTPN12-202ENST00000407343 RBM5P52756 815 aaKnown RBP eCLIP7.01□□□□□ -1.29
PTPN12-202ENST00000407343 ELLP55199 621 aaPredicted RBP7.01□□□□□ -1.29
PTPN12-202ENST00000407343 TUBA4AP68366 448 aa7.01□□□□□ -1.29
PTPN12-202ENST00000407343 B4GALNT1Q00973 533 aa7.01□□□□□ -1.29
PTPN12-202ENST00000407343 MAP3K21Q5TCX8 1036 aa7.01□□□□□ -1.29
PTPN12-202ENST00000407343 ZNF474Q6S9Z5 364 aaPredicted RBP7.01□□□□□ -1.29
PTPN12-202ENST00000407343 ZNF66Q6ZN08 573 aa7.01□□□□□ -1.29
PTPN12-202ENST00000407343 SEMA6DQ8NFY4 1073 aa7.01□□□□□ -1.29
PTPN12-202ENST00000407343 CELF1Q92879 486 aaKnown RBP7.01□□□□□ -1.29
PTPN12-202ENST00000407343 USP13Q92995 863 aaPredicted RBP7.01□□□□□ -1.29
PTPN12-202ENST00000407343 ARRDC3Q96B67 414 aa7.01□□□□□ -1.29
PTPN12-202ENST00000407343 PIGSQ96S52 555 aa7.01□□□□□ -1.29
PTPN12-202ENST00000407343 TM2D2Q9BX73 214 aa7.01□□□□□ -1.29
PTPN12-202ENST00000407343 NUAK2Q9H093 628 aa7.01□□□□□ -1.29
PTPN12-202ENST00000407343 RIOX1Q9H6W3 641 aa7.01□□□□□ -1.29
PTPN12-202ENST00000407343 COX11Q9Y6N1 276 aa7.01□□□□□ -1.29
PTPN12-202ENST00000407343 A0A1B0GVC2 190 aa7□□□□□ -1.29
PTPN12-202ENST00000407343 TTC34A8MYJ7 566 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms