RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 TRPM7Q96QT4 1865 aa16.7■□□□□ 0.26
LSP1-204ENST00000406638 UGT1A9O60656 530 aa16.7■□□□□ 0.26
LSP1-204ENST00000406638 VNN1O95497 513 aa16.7■□□□□ 0.26
LSP1-204ENST00000406638 CD48P09326 243 aa16.7■□□□□ 0.26
LSP1-204ENST00000406638 HDAC4P56524 1084 aa16.7■□□□□ 0.26
LSP1-204ENST00000406638 TRIM32Q13049 653 aa16.7■□□□□ 0.26
LSP1-204ENST00000406638 PDK1Q15118 436 aa16.7■□□□□ 0.26
LSP1-204ENST00000406638 SMTNL2Q2TAL5 461 aa16.7■□□□□ 0.26
LSP1-204ENST00000406638 GALNT4Q8N4A0 578 aa16.7■□□□□ 0.26
LSP1-204ENST00000406638 PPP1R14CQ8TAE6 165 aa16.7■□□□□ 0.26
LSP1-204ENST00000406638 FAM49AQ9H0Q0 323 aaPredicted RBP16.7■□□□□ 0.26
LSP1-204ENST00000406638 UGT1A7Q9HAW7 530 aa16.7■□□□□ 0.26
LSP1-204ENST00000406638 UGT1A10Q9HAW8 530 aa16.7■□□□□ 0.26
LSP1-204ENST00000406638 UGT1A8Q9HAW9 530 aa16.7■□□□□ 0.26
LSP1-204ENST00000406638 IP6K2Q9UHH9 426 aa16.7■□□□□ 0.26
LSP1-204ENST00000406638 CEPT1Q9Y6K0 416 aa16.7■□□□□ 0.26
LSP1-204ENST00000406638 AK5Q9Y6K8 562 aa16.7■□□□□ 0.26
LSP1-204ENST00000406638 TLL2Q9Y6L7 1015 aa16.7■□□□□ 0.26
LSP1-204ENST00000406638 CNTNAP2Q9UHC6 1331 aa16.7■□□□□ 0.26
LSP1-204ENST00000406638 ITM2AO43736 263 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 SIN3BO75182 1162 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 PIGRP01833 764 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 MBTD1Q05BQ5 628 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 TUBB3Q13509 450 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 TTC39BQ5VTQ0 682 aaPredicted RBP16.69■□□□□ 0.26
LSP1-204ENST00000406638 NCCRP1Q6ZVX7 275 aaPredicted RBP16.69■□□□□ 0.26
LSP1-204ENST00000406638 PQLC1Q8N2U9 271 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 LRRC43Q8N309 656 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 TMIGD2Q96BF3 282 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 MCEEQ96PE7 176 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 Q9H521 79 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 TMEM134Q9H6X4 195 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 XAB2Q9HCS7 855 aaKnown RBP16.69■□□□□ 0.26
LSP1-204ENST00000406638 RNF19AQ9NV58 838 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 PARVAQ9NVD7 372 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 GABRQQ9UN88 632 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 APOBEC2Q9Y235 224 aaKnown RBP16.69■□□□□ 0.26
LSP1-204ENST00000406638 TNPO2O14787 897 aaKnown RBP16.69■□□□□ 0.26
LSP1-204ENST00000406638 MSX2P35548 267 aaPredicted RBP16.69■□□□□ 0.26
LSP1-204ENST00000406638 CD97P48960 835 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 RPL26P61254 145 aaKnown RBP16.69■□□□□ 0.26
LSP1-204ENST00000406638 OGDHQ02218 1023 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 GCNT1Q02742 428 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 KCNT1Q5JUK3 1230 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 TMEM270Q6UE05 265 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 SLC26A11Q86WA9 606 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 SMYD1Q8NB12 490 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 TMC2Q8TDI7 906 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 SLC35B4Q969S0 331 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 ZNF778Q96MU6 729 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 RMI1Q9H9A7 625 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 CDHR5Q9HBB8 845 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 APOBEC3GQ9HC16 384 aaKnown RBP16.69■□□□□ 0.26
LSP1-204ENST00000406638 GPBP1L1Q9HC44 474 aaPredicted RBP16.69■□□□□ 0.26
LSP1-204ENST00000406638 GNEQ9Y223 722 aaKnown RBP16.69■□□□□ 0.26
LSP1-204ENST00000406638 DNAJC16Q9Y2G8 782 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 SCINQ9Y6U3 715 aa16.69■□□□□ 0.26
LSP1-204ENST00000406638 MYADML2A6NDP7 307 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 CST8O60676 142 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 SNNO75324 88 aaPredicted RBP16.68■□□□□ 0.26
LSP1-204ENST00000406638 SNRPAP09012 282 aaKnown RBP16.68■□□□□ 0.26
LSP1-204ENST00000406638 RBP3P10745 1247 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 NCF2P19878 526 aaPredicted RBP16.68■□□□□ 0.26
LSP1-204ENST00000406638 ITGAXP20702 1163 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 CCR3P51677 355 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 WASHC5Q12768 1159 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 MXD4Q14582 209 aaPredicted RBP16.68■□□□□ 0.26
LSP1-204ENST00000406638 GRIK4Q16099 956 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 TMEM132AQ24JP5 1023 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 FRMD7Q6ZUT3 714 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 FBXW8Q8N3Y1 598 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 FAIMQ9NVQ4 179 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 H0YCG3 227 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 RFPL1O75677 317 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 HLA-DRAP01903 254 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 C4BPAP04003 597 aaKnown RBP16.68■□□□□ 0.26
LSP1-204ENST00000406638 PSMD6Q15008 389 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 CYTH1Q15438 398 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 KIZQ2M2Z5 673 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 VWA5B1Q5TIE3 1220 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 C15orf39Q6ZRI6 1047 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 POLNQ7Z5Q5 900 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 TLK2Q86UE8 772 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 NDUFAF2Q8N183 169 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 CCDC33Q8N5R6 958 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 TRPV1Q8NER1 839 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 TFB1MQ8WVM0 346 aaKnown RBP16.68■□□□□ 0.26
LSP1-204ENST00000406638 EMID1Q96A84 441 aaPredicted RBP16.68■□□□□ 0.26
LSP1-204ENST00000406638 MRPL4Q9BYD3 311 aaKnown RBP16.68■□□□□ 0.26
LSP1-204ENST00000406638 CXCL16Q9H2A7 254 aa16.68■□□□□ 0.26
LSP1-204ENST00000406638 E9PBE3 544 aa16.67■□□□□ 0.26
LSP1-204ENST00000406638 GPR25O00155 361 aa16.67■□□□□ 0.26
LSP1-204ENST00000406638 KRT37O76014 449 aa16.67■□□□□ 0.26
LSP1-204ENST00000406638 CST3P01034 146 aaPredicted RBP16.67■□□□□ 0.26
LSP1-204ENST00000406638 GNA15P30679 374 aa16.67■□□□□ 0.26
LSP1-204ENST00000406638 SLC26A2P50443 739 aa16.67■□□□□ 0.26
LSP1-204ENST00000406638 ZNF677Q86XU0 584 aa16.67■□□□□ 0.26
LSP1-204ENST00000406638 WDR75Q8IWA0 830 aaKnown RBP16.67■□□□□ 0.26
LSP1-204ENST00000406638 AHI1Q8N157 1196 aa16.67■□□□□ 0.26
LSP1-204ENST00000406638 BBS5Q8N3I7 341 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms