RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 PRICKLE1Q96MT3 831 aaPredicted RBP13.42□□□□□ -0.26
PRAME-206ENST00000406503 LRRC4Q9HBW1 653 aa13.42□□□□□ -0.26
PRAME-206ENST00000406503 GDPD2Q9HCC8 539 aa13.42□□□□□ -0.26
PRAME-206ENST00000406503 TM9SF3Q9HD45 589 aa13.42□□□□□ -0.26
PRAME-206ENST00000406503 OSGEPQ9NPF4 335 aa13.42□□□□□ -0.26
PRAME-206ENST00000406503 GGA2Q9UJY4 613 aa13.42□□□□□ -0.26
PRAME-206ENST00000406503 INTS6Q9UL03 887 aaKnown RBP13.42□□□□□ -0.26
PRAME-206ENST00000406503 APOBEC2Q9Y235 224 aaKnown RBP13.42□□□□□ -0.26
PRAME-206ENST00000406503 PCDHGB2Q9Y5G2 931 aa13.42□□□□□ -0.26
PRAME-206ENST00000406503 MGAQ8IWI9 3026 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 TRIM49BA6NDI0 452 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 PIK3R2O00459 728 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 KCNK3O14649 394 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 FLRT2O43155 660 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 CALCAP01258 141 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 FYNP06241 537 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 IGHV4-34P06331 123 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 VDRP11473 427 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 RGS7P49802 495 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 CAMK2BQ13554 666 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 COBLL1Q53SF7 1204 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 ANKRD40Q6AI12 368 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 PMF1Q6P1K2 205 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 C19orf48Q6RUI8 117 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 IL27RAQ6UWB1 636 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 LCLAT1Q6UWP7 414 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 SNX19Q92543 992 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 KAT5Q92993 513 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 TMA16Q96EY4 203 aaKnown RBP13.41□□□□□ -0.26
PRAME-206ENST00000406503 MRGPRX3Q96LB0 322 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 DNAI2Q9GZS0 605 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 EBF2Q9HAK2 575 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 CNGB3Q9NQW8 809 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 ABCC13Q9NSE7 274 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 SERGEFQ9UGK8 458 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 ANKRD6Q9Y2G4 727 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 ASXL3Q9C0F0 2248 aa13.41□□□□□ -0.26
PRAME-206ENST00000406503 SLC16A3O15427 465 aaKnown RBP13.4□□□□□ -0.26
PRAME-206ENST00000406503 STX10O60499 249 aa13.4□□□□□ -0.26
PRAME-206ENST00000406503 TBL1XO60907 577 aa13.4□□□□□ -0.26
PRAME-206ENST00000406503 SEMA4FO95754 770 aa13.4□□□□□ -0.26
PRAME-206ENST00000406503 DLDP09622 509 aaKnown RBP13.4□□□□□ -0.26
PRAME-206ENST00000406503 SETSIPP0DME0 302 aa13.4□□□□□ -0.26
PRAME-206ENST00000406503 LCP1P13796 627 aa13.4□□□□□ -0.26
PRAME-206ENST00000406503 CD19P15391 556 aa13.4□□□□□ -0.26
PRAME-206ENST00000406503 CTSKP43235 329 aa13.4□□□□□ -0.26
PRAME-206ENST00000406503 GRIA4P48058 902 aa13.4□□□□□ -0.26
PRAME-206ENST00000406503 AFF3P51826 1226 aaKnown RBP13.4□□□□□ -0.26
PRAME-206ENST00000406503 SLC8A3P57103 927 aa13.4□□□□□ -0.26
PRAME-206ENST00000406503 ZNF445P59923 1031 aa13.4□□□□□ -0.26
PRAME-206ENST00000406503 LRMPQ12912 555 aa13.4□□□□□ -0.26
PRAME-206ENST00000406503 COL28A1Q2UY09 1125 aa13.4□□□□□ -0.26
PRAME-206ENST00000406503 TCERG1LQ5VWI1 586 aa13.4□□□□□ -0.26
PRAME-206ENST00000406503 RHBDD1Q8TEB9 315 aa13.4□□□□□ -0.26
PRAME-206ENST00000406503 RNF139Q8WU17 664 aa13.4□□□□□ -0.26
PRAME-206ENST00000406503 ERCC4Q92889 916 aaPredicted RBP13.4□□□□□ -0.26
PRAME-206ENST00000406503 IPO9Q96P70 1041 aaKnown RBP13.4□□□□□ -0.26
PRAME-206ENST00000406503 BTBD1Q9H0C5 482 aa13.4□□□□□ -0.26
PRAME-206ENST00000406503 CCDC86Q9H6F5 360 aaKnown RBP13.4□□□□□ -0.26
PRAME-206ENST00000406503 HESX1Q9UBX0 185 aa13.4□□□□□ -0.26
PRAME-206ENST00000406503 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.4□□□□□ -0.263e-6■■□□□ 14.2
PRAME-206ENST00000406503 PTPRQQ9UMZ3 2332 aa13.4□□□□□ -0.26
PRAME-206ENST00000406503 H0Y8X5 98 aa13.39□□□□□ -0.27
PRAME-206ENST00000406503 PAPSS1O43252 624 aaPredicted RBP13.39□□□□□ -0.27
PRAME-206ENST00000406503 ACSL4O60488 711 aa13.39□□□□□ -0.27
PRAME-206ENST00000406503 SIN3BO75182 1162 aa13.39□□□□□ -0.27
PRAME-206ENST00000406503 ARID5AQ03989 594 aa13.39□□□□□ -0.27
PRAME-206ENST00000406503 ZBTB16Q05516 673 aa13.39□□□□□ -0.27
PRAME-206ENST00000406503 E2F5Q15329 346 aa13.39□□□□□ -0.27
PRAME-206ENST00000406503 FSCBQ5H9T9 825 aa13.39□□□□□ -0.27
PRAME-206ENST00000406503 MPP7Q5T2T1 576 aa13.39□□□□□ -0.27
PRAME-206ENST00000406503 ZNF658Q5TYW1 1059 aaPredicted RBP13.39□□□□□ -0.27
PRAME-206ENST00000406503 FMR1NBQ8N0W7 255 aaPredicted RBP13.39□□□□□ -0.27
PRAME-206ENST00000406503 SIX6OS1Q8N1H7 587 aa13.39□□□□□ -0.27
PRAME-206ENST00000406503 LMO3Q8TAP4 145 aa13.39□□□□□ -0.27
PRAME-206ENST00000406503 SPATA20Q8TB22 786 aa13.39□□□□□ -0.27
PRAME-206ENST00000406503 TTC17Q96AE7 1141 aa13.39□□□□□ -0.27
PRAME-206ENST00000406503 FCRL2Q96LA5 508 aaPredicted RBP13.39□□□□□ -0.27
PRAME-206ENST00000406503 RSPH9Q9H1X1 276 aaPredicted RBP13.39□□□□□ -0.27
PRAME-206ENST00000406503 FBRSQ9HAH7 460 aa13.39□□□□□ -0.27
PRAME-206ENST00000406503 DKK4Q9UBT3 224 aa13.39□□□□□ -0.27
PRAME-206ENST00000406503 PLA2G4CQ9UP65 541 aa13.39□□□□□ -0.27
PRAME-206ENST00000406503 COL27A1Q8IZC6 1860 aaPredicted RBP13.38□□□□□ -0.27
PRAME-206ENST00000406503 PCDHGA12O60330 932 aa13.38□□□□□ -0.27
PRAME-206ENST00000406503 FSBPO95073 299 aa13.38□□□□□ -0.27
PRAME-206ENST00000406503 WNT1P04628 370 aa13.38□□□□□ -0.27
PRAME-206ENST00000406503 BRD2P25440 801 aaKnown RBP13.38□□□□□ -0.27
PRAME-206ENST00000406503 CD27P26842 260 aa13.38□□□□□ -0.27
PRAME-206ENST00000406503 CTSOP43234 321 aaPredicted RBP13.38□□□□□ -0.27
PRAME-206ENST00000406503 RPL34P49207 117 aaKnown RBP13.38□□□□□ -0.27
PRAME-206ENST00000406503 RPS24P62847 133 aaKnown RBP13.38□□□□□ -0.27
PRAME-206ENST00000406503 FKBP3Q00688 224 aaKnown RBP13.38□□□□□ -0.27
PRAME-206ENST00000406503 IL9RQ01113 521 aa13.38□□□□□ -0.27
PRAME-206ENST00000406503 ACAP1Q15027 740 aa13.38□□□□□ -0.27
PRAME-206ENST00000406503 SOWAHCQ53LP3 525 aaPredicted RBP13.38□□□□□ -0.27
PRAME-206ENST00000406503 ZNF776Q68DI1 518 aaPredicted RBP13.38□□□□□ -0.27
PRAME-206ENST00000406503 TMEM270Q6UE05 265 aa13.38□□□□□ -0.27
PRAME-206ENST00000406503 MMS22LQ6ZRQ5 1243 aa13.38□□□□□ -0.27
PRAME-206ENST00000406503 PDZD3Q86UT5 571 aa13.38□□□□□ -0.27
PRAME-206ENST00000406503 ENGASEQ8NFI3 743 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms