RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 NR6A1Q15406 480 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 ZNF786Q8N393 782 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 OR5B17Q8NGF7 314 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 DEAF1O75398 565 aaPredicted RBP18.59■□□□□ 0.57
COL18A1-204ENST00000400337 NOS2P35228 1153 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 FMO1Q01740 532 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 PRKAA1Q13131 559 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 SHC3Q92529 594 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 PGM2Q96G03 612 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 KIF1CO43896 1103 aaKnown RBP18.59■□□□□ 0.57
COL18A1-204ENST00000400337 HNRNPCP07910 306 aaKnown RBP eCLIP18.59■□□□□ 0.576e-7■□□□□ 8.9
COL18A1-204ENST00000400337 FGRP09769 529 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 MLNP12872 115 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 GPC1P35052 558 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 NCALDP61601 193 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 FAM183BPQ6ZVS7 135 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 DEFB107AQ8IZN7 70 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 CENPLQ8N0S6 344 aaPredicted RBP18.59■□□□□ 0.57
COL18A1-204ENST00000400337 USP6NLQ92738 828 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 DCLRE1BQ9H816 532 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 GNG14A0A1W2PPG7 69 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 SPATA31C2B4DYI2 1134 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 TRPC1P48995 793 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 CLK1P49759 484 aaKnown RBP18.59■□□□□ 0.57
COL18A1-204ENST00000400337 CCNG1P51959 295 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 TATDN1Q6P1N9 297 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 CCDC81Q6ZN84 652 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 DIS3LQ8TF46 1054 aaKnown RBP18.59■□□□□ 0.57
COL18A1-204ENST00000400337 GFM2Q969S9 779 aaKnown RBP18.59■□□□□ 0.57
COL18A1-204ENST00000400337 DYRK1BQ9Y463 629 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 CPSF4O95639 269 aaKnown RBP18.59■□□□□ 0.57
COL18A1-204ENST00000400337 CNTN1Q12860 1018 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 SHROOM1Q2M3G4 852 aaPredicted RBP18.59■□□□□ 0.57
COL18A1-204ENST00000400337 SLC30A9Q6PML9 568 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 B3GALNT2Q8NCR0 500 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 ATXN2LQ8WWM7 1075 aaKnown RBP18.59■□□□□ 0.57
COL18A1-204ENST00000400337 ETNK2Q9NVF9 386 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 THAP1Q9NVV9 213 aa18.59■□□□□ 0.57
COL18A1-204ENST00000400337 ATRNO75882 1429 aa18.58■□□□□ 0.57
COL18A1-204ENST00000400337 MGAT4DA6NG13 374 aa18.58■□□□□ 0.57
COL18A1-204ENST00000400337 M0R3G1 203 aa18.58■□□□□ 0.57
COL18A1-204ENST00000400337 CCNT2O60583 730 aaKnown RBP18.58■□□□□ 0.57
COL18A1-204ENST00000400337 SMIM10L2AP0DMW4 78 aa18.58■□□□□ 0.57
COL18A1-204ENST00000400337 SMIM10L2BP0DMW5 78 aa18.58■□□□□ 0.57
COL18A1-204ENST00000400337 RAG1P15918 1043 aa18.58■□□□□ 0.57
COL18A1-204ENST00000400337 RANBP1P43487 201 aa18.58■□□□□ 0.57
COL18A1-204ENST00000400337 ZCCHC23Q6ZST2 131 aa18.58■□□□□ 0.57
COL18A1-204ENST00000400337 HOXC6P09630 235 aa18.58■□□□□ 0.57
COL18A1-204ENST00000400337 S100A5P33763 92 aa18.58■□□□□ 0.57
COL18A1-204ENST00000400337 MMRN1Q13201 1228 aa18.58■□□□□ 0.57
COL18A1-204ENST00000400337 MRPL9Q9BYD2 267 aaKnown RBP18.58■□□□□ 0.57
COL18A1-204ENST00000400337 OR12D3Q9UGF7 316 aa18.58■□□□□ 0.57
COL18A1-204ENST00000400337 LZTS1Q9Y250 596 aa18.58■□□□□ 0.57
COL18A1-204ENST00000400337 ARHGEF9O43307 516 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 GJB1P08034 283 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 PCNAP12004 261 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 CRABP2P29373 138 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 CHI3L1P36222 383 aaPredicted RBP18.58■□□□□ 0.56
COL18A1-204ENST00000400337 MARCKSL1P49006 195 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 ZNF143P52747 638 aaPredicted RBP18.58■□□□□ 0.56
COL18A1-204ENST00000400337 TBL3Q12788 808 aaKnown RBP18.58■□□□□ 0.56
COL18A1-204ENST00000400337 GJC2Q5T442 439 aaPredicted RBP18.58■□□□□ 0.56
COL18A1-204ENST00000400337 ERAP2Q6P179 960 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 MOB2Q70IA6 237 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 SEMA4DQ92854 862 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 VAT1Q99536 393 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 KCND1Q9NSA2 647 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 LNPEPQ9UIQ6 1025 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 FCHO1O14526 889 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 TGFB1I1O43294 461 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 ADRA1DP25100 572 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 KLRC2P26717 231 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 UBE3AQ05086 875 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 ITGB3BPQ13352 177 aaPredicted RBP18.58■□□□□ 0.56
COL18A1-204ENST00000400337 MICU2Q8IYU8 434 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 FAM9CQ8IZT9 166 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 IMPAD1Q9NX62 359 aa18.58■□□□□ 0.56
COL18A1-204ENST00000400337 KATNA1O75449 491 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 ALDH1A2O94788 518 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 SLC45A4Q5BKX6 768 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 FBXO39Q8N4B4 442 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 OSGEPL1Q9H4B0 414 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 CXorf56Q9H5V9 222 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 PIF1Q9H611 641 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 ABCC13Q9NSE7 274 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 RBAK-RBAKDNI3L0D1 243 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 NPR3P17342 541 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 DEPDC1Q5TB30 811 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 PLPPR4Q7Z2D5 763 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 GLT6D1Q7Z4J2 308 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 TRPM4Q8TD43 1214 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 ZNF75CPQ92670 426 aaPredicted RBP18.57■□□□□ 0.56
COL18A1-204ENST00000400337 SH3GL3Q99963 347 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 HMX1Q9NP08 348 aaPredicted RBP18.57■□□□□ 0.56
COL18A1-204ENST00000400337 TMEM39AQ9NV64 488 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 TAS2R13Q9NYV9 303 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 B4GALT5O43286 388 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 EFCAB14O75071 495 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 NCKAP1LP55160 1127 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 PWP1Q13610 501 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms