RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 GEMIN8Q9NWZ8 242 aaKnown RBP19■□□□□ 0.63
USP48-204ENST00000400301 SLC12A4Q9UP95 1085 aa19■□□□□ 0.63
USP48-204ENST00000400301 BNIP3LO60238 219 aa19■□□□□ 0.63
USP48-204ENST00000400301 MYCP01106 439 aaPredicted RBP19■□□□□ 0.63
USP48-204ENST00000400301 ZCCHC18P0CG32 403 aa19■□□□□ 0.63
USP48-204ENST00000400301 ESRRGP62508 458 aa19■□□□□ 0.63
USP48-204ENST00000400301 DSG1Q02413 1049 aa19■□□□□ 0.63
USP48-204ENST00000400301 NBPF20Q3BBV1 942 aa19■□□□□ 0.63
USP48-204ENST00000400301 LAYNQ6UX15 382 aa19■□□□□ 0.63
USP48-204ENST00000400301 IZUMO2Q6UXV1 221 aa19■□□□□ 0.63
USP48-204ENST00000400301 C15orf39Q6ZRI6 1047 aa19■□□□□ 0.63
USP48-204ENST00000400301 ALYREFQ86V81 257 aaKnown RBP19■□□□□ 0.63
USP48-204ENST00000400301 GBA2Q9HCG7 927 aaPredicted RBP19■□□□□ 0.63
USP48-204ENST00000400301 TSR3Q9UJK0 312 aaKnown RBP19■□□□□ 0.63
USP48-204ENST00000400301 CHKBQ9Y259 395 aa19■□□□□ 0.63
USP48-204ENST00000400301 SCN7AQ01118 1682 aa19■□□□□ 0.63
USP48-204ENST00000400301 DCXO43602 365 aa19■□□□□ 0.63
USP48-204ENST00000400301 POMCP01189 267 aa19■□□□□ 0.63
USP48-204ENST00000400301 WNT7BP56706 349 aa19■□□□□ 0.63
USP48-204ENST00000400301 GOLGA2P5Q9HBQ8 144 aa19■□□□□ 0.63
USP48-204ENST00000400301 TCF7L2Q9NQB0 619 aa19■□□□□ 0.63
USP48-204ENST00000400301 TCRBV7S3A2A0A539 114 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 MAGEB16A2A368 324 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 C2orf71A6NGG8 1288 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 TSPAN1O60635 241 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 SMIM10L2AP0DMW4 78 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 SMIM10L2BP0DMW5 78 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 GAD2Q05329 585 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 CCDC153Q494R4 210 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 CMASQ8NFW8 434 aaPredicted RBP18.99■□□□□ 0.63
USP48-204ENST00000400301 MCRS1Q96EZ8 462 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 CERS2Q96G23 380 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 APBA2Q99767 749 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 PHACTR1Q9C0D0 580 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 TKTL2Q9H0I9 626 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 COL2A1P02458 1487 aaPredicted RBP18.99■□□□□ 0.63
USP48-204ENST00000400301 RNF103-CHMP3A0A140T963 221 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 OLFM3Q96PB7 478 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 TXLNGYQ9BZA5 131 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 TRHDEQ9UKU6 1024 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 GPR182O15218 404 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 C22orf31O95567 290 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 UBAP2Q5T6F2 1119 aaKnown RBP18.99■□□□□ 0.63
USP48-204ENST00000400301 C9orf57Q5W0N0 161 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 RHBDF2Q6PJF5 856 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 LRRC74BQ6ZQY2 392 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 MIB1Q86YT6 1006 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 PSTKQ8IV42 348 aaKnown RBP18.99■□□□□ 0.63
USP48-204ENST00000400301 DCP1BQ8IZD4 617 aaKnown RBP18.99■□□□□ 0.63
USP48-204ENST00000400301 NAT8LQ8N9F0 302 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 P2RY11Q96G91 374 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 TRIM15Q9C019 465 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 TSPYL2Q9H2G4 693 aaPredicted RBP18.99■□□□□ 0.63
USP48-204ENST00000400301 ATXN3LQ9H3M9 355 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 COL16A1Q07092 1604 aaPredicted RBP18.99■□□□□ 0.63
USP48-204ENST00000400301 VAPBO95292 243 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 ERCC2P18074 760 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 ILDR2Q71H61 639 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 CHSY1Q86X52 802 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 GALNT4Q8N4A0 578 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 PCDH19Q8TAB3 1148 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 SDCBP2Q9H190 292 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 ANLNQ9NQW6 1124 aa18.99■□□□□ 0.63
USP48-204ENST00000400301 E7ENQ6 273 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 GRIN3BO60391 1043 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 KRT36O76013 467 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 PDE5AO76074 875 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 RGS2P41220 211 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 PTDSS1P48651 473 aaKnown RBP18.98■□□□□ 0.63
USP48-204ENST00000400301 PDAP1Q13442 181 aaKnown RBP18.98■□□□□ 0.63
USP48-204ENST00000400301 MPP2Q14168 576 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 NOL9Q5SY16 702 aaKnown RBP18.98■□□□□ 0.63
USP48-204ENST00000400301 DPY19L2P1Q6NXN4 242 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 NDRG1Q92597 394 aaKnown RBP18.98■□□□□ 0.63
USP48-204ENST00000400301 PLLPQ9Y342 182 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 COL4A1P02462 1669 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 MAGEA13PA6NCF6 341 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 E5RI56 91 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 FKBP6O75344 327 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 PSMG1O95456 288 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 FRA10AC1Q70Z53 315 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 UBE2OQ9C0C9 1292 aaKnown RBP18.98■□□□□ 0.63
USP48-204ENST00000400301 RRN3Q9NYV6 651 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 BCLAF3A2AJT9 711 aaKnown RBP18.98■□□□□ 0.63
USP48-204ENST00000400301 MPOP05164 745 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 NPY2RP49146 381 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 SMARCD1Q96GM5 515 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 NMUR2Q9GZQ4 415 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 NMRAL1Q9HBL8 299 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 OR12D3Q9UGF7 316 aa18.98■□□□□ 0.63
USP48-204ENST00000400301 PHGDHO43175 533 aaKnown RBP18.97■□□□□ 0.63
USP48-204ENST00000400301 PAPSS1O43252 624 aaPredicted RBP18.97■□□□□ 0.63
USP48-204ENST00000400301 H2AFYO75367 372 aaKnown RBP18.97■□□□□ 0.63
USP48-204ENST00000400301 ATG7O95352 703 aa18.97■□□□□ 0.63
USP48-204ENST00000400301 PROCP04070 461 aa18.97■□□□□ 0.63
USP48-204ENST00000400301 ITGA2BP08514 1039 aa18.97■□□□□ 0.63
USP48-204ENST00000400301 TBL3Q12788 808 aaKnown RBP18.97■□□□□ 0.63
USP48-204ENST00000400301 NAB1Q13506 487 aa18.97■□□□□ 0.63
USP48-204ENST00000400301 ARHGAP18Q8N392 663 aa18.97■□□□□ 0.63
USP48-204ENST00000400301 CATSPER1Q8NEC5 780 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms