RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 SMOC2Q9H3U7 446 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 PNPLA8Q9NP80 782 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 DTLQ9NZJ0 730 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 CPQQ9Y646 472 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 TCRBV7S3A2A0A539 114 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 DFFAO00273 331 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 TRIM24O15164 1050 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 HDCP19113 662 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 DPYSL2Q16555 572 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 CAPN12Q6ZSI9 719 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 RFX8Q6ZV50 586 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 KDELC2Q7Z4H8 507 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 TMC8Q8IU68 726 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 TDHQ8IZJ6 230 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 CCDC110Q8TBZ0 833 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 ZNF419Q96HQ0 510 aaPredicted RBP12.07□□□□□ -0.48
SKA3-203ENST00000400018 ZFYVE19Q96K21 471 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 SPATA17Q96L03 361 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 IL37Q9NZH6 218 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 TRPM5Q9NZQ8 1165 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 CLEC4EQ9ULY5 219 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 COLQQ9Y215 455 aaPredicted RBP12.07□□□□□ -0.48
SKA3-203ENST00000400018 LAMA1P25391 3075 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 ENDOD1O94919 500 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 PRAMEF12O95522 483 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 VAV1P15498 845 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 IGFBP4P22692 258 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 GLDCP23378 1020 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 CORO1AP31146 461 aaKnown RBP12.07□□□□□ -0.48
SKA3-203ENST00000400018 ATP5C1P36542 298 aaKnown RBP12.07□□□□□ -0.48
SKA3-203ENST00000400018 TUBP50607 506 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 PLTPP55058 493 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 ERVK-21P61565 698 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 SMAD3P84022 425 aaKnown RBP12.07□□□□□ -0.48
SKA3-203ENST00000400018 AP1B1Q10567 949 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 EIF4EBP2Q13542 120 aaPredicted RBP12.07□□□□□ -0.48
SKA3-203ENST00000400018 BYSLQ13895 437 aaKnown RBP12.07□□□□□ -0.48
SKA3-203ENST00000400018 VEPH1Q14D04 833 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 DNAJC21Q5F1R6 531 aaKnown RBP12.07□□□□□ -0.48
SKA3-203ENST00000400018 MS4A13Q5J8X5 152 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 TPGS2Q68CL5 300 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 FBXL22Q6P050 247 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 DARS2Q6PI48 645 aaKnown RBP12.07□□□□□ -0.48
SKA3-203ENST00000400018 Q7L0L9 218 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 SRLQ86TD4 932 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 PACS2Q86VP3 889 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 MMGT1Q8N4V1 131 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 ADAMTS19Q8TE59 1207 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 TIFAQ96CG3 184 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 TRIM56Q9BRZ2 755 aaKnown RBP12.07□□□□□ -0.48
SKA3-203ENST00000400018 EMILIN2Q9BXX0 1053 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 LRRC3Q9BY71 257 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 DDX56Q9NY93 547 aaKnown RBP12.07□□□□□ -0.48
SKA3-203ENST00000400018 UBP1Q9NZI7 540 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 ASIC3Q9UHC3 531 aa12.07□□□□□ -0.48
SKA3-203ENST00000400018 RRP15Q9Y3B9 282 aaKnown RBP12.07□□□□□ -0.48
SKA3-203ENST00000400018 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.07□□□□□ -0.48
SKA3-203ENST00000400018 FAM92AA1XBS5 289 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 TJP3O95049 919 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 RTN3O95197 1032 aaPredicted RBP12.06□□□□□ -0.48
SKA3-203ENST00000400018 RHOP08100 348 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 CSH1P0DML2 217 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 CSH2P0DML3 217 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 CCR1P32246 355 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 AUHQ13825 339 aaKnown RBP12.06□□□□□ -0.48
SKA3-203ENST00000400018 GRIN2CQ14957 1233 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 RARS2Q5T160 578 aaKnown RBP12.06□□□□□ -0.48
SKA3-203ENST00000400018 HECTD3Q5T447 861 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 LRRC38Q5VT99 294 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 CCDC25Q86WR0 208 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 ZNF354CQ86Y25 554 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 RNF135Q8IUD6 432 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 IRGQQ8WZA9 623 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 P3H4Q92791 437 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 FNIP2Q9P278 1114 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 NEU3Q9UQ49 428 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 PCDHA11Q9Y5I1 949 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 APOL1O14791 398 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 KCNN4O15554 427 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 MOSPD3O75425 235 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 STC2O76061 302 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 GLP2RO95838 553 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 ZDHHC11BP0C7U3 371 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 ARL4AP40617 200 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 TCEAL5Q5H9L2 206 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 SND1Q7KZF4 910 aaKnown RBP eCLIP12.06□□□□□ -0.48
SKA3-203ENST00000400018 CHSY1Q86X52 802 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 SHKBP1Q8TBC3 707 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 WFDC5Q8TCV5 224 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 MSRAQ9UJ68 235 aa12.06□□□□□ -0.48
SKA3-203ENST00000400018 A0A0D9SEW6 157 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 GOLGA6L10A0A0M3HER8 536 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 KCNU1A8MYU2 1149 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 E9PAM4 449 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 F7P08709 466 aaPredicted RBP12.05□□□□□ -0.48
SKA3-203ENST00000400018 CEBPBP17676 345 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 PAX3P23760 479 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 WEE1P30291 646 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 VIPR2P41587 438 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 GPR158Q5T848 1215 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms