RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 TSGA10IPQ3SY00 556 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 NAT16Q8N8M0 369 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 KCNS3Q9BQ31 491 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 DUX4Q9UBX2 424 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 MCM8Q9UJA3 840 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 ZMYND8Q9ULU4 1186 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 IGF2BP3O00425 579 aaKnown RBP eCLIP12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 CDH16O75309 829 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 TPBGLP0DKB5 382 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 AGPAT5Q9NUQ2 364 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 SCAMP3O14828 347 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 PEX1O43933 1283 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 PABPC1P11940 636 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 RARGP13631 454 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 GRB10Q13322 594 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 NFYCQ13952 458 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 UBXN2BQ14CS0 331 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 ATP6AP1LQ52LC2 224 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 NLRP14Q86W24 1093 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 LZTR1Q8N653 840 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 ELMO1Q92556 727 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 TKTL2Q9H0I9 626 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 THAP2Q9H0W7 228 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 ASB7Q9H672 318 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 MANSC1Q9H8J5 431 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 SUCOQ9UBS9 1254 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 H0YC42 278 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 M0R3G1 203 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 PLSCR1O15162 318 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 CAPN1P07384 714 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 MMP13P45452 471 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 COPZ1P61923 177 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 C2CD6Q53TS8 623 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 SLC22A9Q8IVM8 553 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 COL26A1Q96A83 441 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 TBCDQ9BTW9 1192 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 ZNF112Q9UJU3 913 aa12.34□□□□□ -0.43
CACNA1C-213ENST00000399629 PIK3C2BO00750 1634 aa12.33□□□□□ -0.43
CACNA1C-213ENST00000399629 PXDNLA1KZ92 1463 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 SLC25A12O75746 678 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 PLEKP08567 350 aaPredicted RBP12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 FGRP09769 529 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 ALPPL2P10696 532 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 MAD2L1Q13257 205 aaPredicted RBP12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 KLHL35Q6PF15 583 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 RNF44Q7L0R7 432 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 SPATA4Q8NEY3 305 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 RUBCNQ92622 972 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 LPPQ93052 612 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 QRFPRQ96P65 431 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 DNPEPQ9ULA0 475 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 SLC27A5Q9Y2P5 690 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 TNS2Q63HR2 1409 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 FRMPD1Q5SYB0 1578 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 FAM220BPB1ANY3 271 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 TRIM49D1C9J1S8 452 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 O00370 1275 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 GPR15P49685 360 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 GIT2Q14161 759 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 NR6A1Q15406 480 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 PKN2Q16513 984 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 GPR158Q5T848 1215 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 LRRC8DQ7L1W4 858 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 NACC2Q96BF6 587 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 CARD9Q9H257 536 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 SNX12Q9UMY4 172 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 SLC27A6Q9Y2P4 619 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 MTO1Q9Y2Z2 717 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 SERPINB3P29508 390 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 RAP1GAP2Q684P5 730 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 PSRC1Q6PGN9 363 aaPredicted RBP12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 RIBC1Q8N443 379 aaPredicted RBP12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 TMEM237Q96Q45 408 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 ATP13A3Q9H7F0 1226 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 PARVBQ9HBI1 364 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 NUDT5Q9UKK9 219 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 ABCA6Q8N139 1617 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 A0A1W2PQJ5 194 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 DAB1O75553 588 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 USP1O94782 785 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 MPOP05164 745 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 PAX3P23760 479 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 PON1P27169 355 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 SEC13P55735 322 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 WLSQ5T9L3 541 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 MOB2Q70IA6 237 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 SMG7Q92540 1137 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 MTFMTQ96DP5 389 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 POLR1BQ9H9Y6 1135 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 NEDD8-MDP1E9PL57 170 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 NR5A2O00482 541 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 YBX3P16989 372 aaKnown RBP eCLIP12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 CLK1P49759 484 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 ERFP50548 548 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 DACT2Q5SW24 774 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 PARGQ86W56 976 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 MCEMP1Q8IX19 187 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 SH3GL1Q99961 368 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 DPY30Q9C005 99 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 DDX28Q9NUL7 540 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms