RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 ATMINO43313 823 aaPredicted RBP8.14□□□□□ -1.11
USP47-203ENST00000399455 ATP6V1C1P21283 382 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 FLOT2Q14254 428 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 BTN2A2Q8WVV5 523 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 FERD3LQ96RJ6 166 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 CNPPD1Q9BV87 410 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 FAM153AQ9UHL3 310 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 VANGL2Q9ULK5 521 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 A0A1B0GTH6 734 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 RASSF10A6NK89 507 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 YDJCA8MPS7 323 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 RHPN2P1A8MT19 583 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 FKBP9O95302 570 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 GLRA2P23416 452 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 PTENP60484 403 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 MCL1Q07820 350 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 BOP1Q14137 746 aaKnown RBP8.13□□□□□ -1.11
USP47-203ENST00000399455 TMEM119Q4V9L6 283 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 FUT10Q6P4F1 479 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 LBX2Q6XYB7 198 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 FKBP9P1Q75LS8 142 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 BCAS4Q8TDM0 211 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 GRAMD1AQ96CP6 724 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 ARHGAP9Q9BRR9 750 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 BCO2Q9BYV7 579 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 PHPT1Q9NRX4 125 aaPredicted RBP8.13□□□□□ -1.11
USP47-203ENST00000399455 GULP1Q9UBP9 304 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 PTPRJQ12913 1337 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 EPC2Q52LR7 807 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 NRSN1Q8IZ57 195 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 LRRC52Q8N7C0 313 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 TTC29Q8NA56 475 aaPredicted RBP8.13□□□□□ -1.11
USP47-203ENST00000399455 ULBP1Q9BZM6 244 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 KLHL28Q9NXS3 571 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 MPP6Q9NZW5 540 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 TUBGCP4Q9UGJ1 667 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 CHMP2BQ9UQN3 213 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 CDY1Q9Y6F8 540 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 CHD2O14647 1828 aaKnown RBP8.13□□□□□ -1.11
USP47-203ENST00000399455 JCHAINP01591 159 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 GZMAP12544 262 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 TYMPP19971 482 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 BLKP51451 505 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 SMAD3P84022 425 aaKnown RBP8.13□□□□□ -1.11
USP47-203ENST00000399455 DDX39BQ13838 428 aaKnown RBP8.13□□□□□ -1.11
USP47-203ENST00000399455 SPIDRQ14159 915 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 COLEC12Q5KU26 742 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 RAP1GAP2Q684P5 730 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 ESRP1Q6NXG1 681 aaKnown RBP8.13□□□□□ -1.11
USP47-203ENST00000399455 ATL1Q8WXF7 558 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 KLHL29Q96CT2 875 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 ELOVL6Q9H5J4 265 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 IARS2Q9NSE4 1012 aaKnown RBP8.13□□□□□ -1.11
USP47-203ENST00000399455 CYP3A7-CYP3A51PA0A087WV96 503 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 GYG2O15488 501 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 PRNPP04156 253 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 YBX3P16989 372 aaKnown RBP eCLIP8.13□□□□□ -1.11
USP47-203ENST00000399455 SMPD1P17405 629 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 DGKAP23743 735 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 CYP3A7P24462 503 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 HPCAL1P37235 193 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 DHPSP49366 369 aaPredicted RBP8.13□□□□□ -1.11
USP47-203ENST00000399455 CCR3P51677 355 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 ALDH6A1Q02252 535 aaKnown RBP8.13□□□□□ -1.11
USP47-203ENST00000399455 CDH17Q12864 832 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 TARBP2Q15633 366 aaKnown RBP8.13□□□□□ -1.11
USP47-203ENST00000399455 CHST9Q7L1S5 443 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 VCPIP1Q96JH7 1222 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 RAD21L1Q9H4I0 556 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 COLEC10Q9Y6Z7 277 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 SNTNA6NMZ2 147 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 COX7A2P14406 83 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 MTHFRP42898 656 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 STX3Q13277 289 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 LVRNQ6Q4G3 990 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 DEFB106AQ8N104 65 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.13□□□□□ -1.113e-6■■■■■ 50.8
USP47-203ENST00000399455 BBS4Q96RK4 519 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 TLR9Q9NR96 1032 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 RUVBL2Q9Y230 463 aaKnown RBP8.13□□□□□ -1.11
USP47-203ENST00000399455 ASB3Q9Y575 518 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 CNTNAP1P78357 1384 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 GSAPA4D1B5 854 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 NCF1BA6NI72 391 aaPredicted RBP8.13□□□□□ -1.11
USP47-203ENST00000399455 NCF1CA8MVU1 366 aaPredicted RBP8.13□□□□□ -1.11
USP47-203ENST00000399455 KRT33AO76009 404 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 BAIAP3O94812 1187 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 IFNA16P05015 189 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 CFIP05156 583 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 PLEKP08567 350 aaPredicted RBP8.13□□□□□ -1.11
USP47-203ENST00000399455 NCF1P14598 390 aaPredicted RBP8.13□□□□□ -1.11
USP47-203ENST00000399455 GTF2A1P52655 376 aaPredicted RBP8.13□□□□□ -1.11
USP47-203ENST00000399455 NDUFA9Q16795 377 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 ZC3H14Q6PJT7 736 aaKnown RBP8.13□□□□□ -1.11
USP47-203ENST00000399455 GPR135Q8IZ08 494 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 CDK20Q8IZL9 346 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 WFIKKN2Q8TEU8 576 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 CMTM5Q96DZ9 223 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 SERPINB12Q96P63 405 aa8.13□□□□□ -1.11
USP47-203ENST00000399455 DDX47Q9H0S4 455 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms