RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 FBXL22Q6P050 247 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SCYL2Q6P3W7 929 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SND1Q7KZF4 910 aaKnown RBP eCLIP12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 CIR1Q86X95 450 aaPredicted RBP12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 LGI2Q8N0V4 545 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ZNF687Q8N1G0 1237 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 TPCN2Q8NHX9 752 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 WFDC5Q8TCV5 224 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 CSGALNACT1Q8TDX6 532 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 BHMTQ93088 406 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 BBS2Q9BXC9 721 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 FBRSL1Q9HCM7 1045 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 LUC7LQ9NQ29 371 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ARHGEF3Q9NR81 526 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PLK2Q9NYY3 685 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 WNT16Q9UBV4 365 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 HYOU1Q9Y4L1 999 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 IGLV3-10A0A075B6K4 115 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ANTXRLA6NF34 631 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TMEM110-MUSTN1A8MSY1 372 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 NEDD8-MDP1E9PL57 170 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 PI4K2BG5E9Z4 385 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 BUB1O43683 1085 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CACNG3O60359 315 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 RNF8O76064 485 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ADH1CP00326 375 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CHRM1P11229 460 aaPredicted RBP12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TYRP14679 529 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 SLC6A11P48066 632 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 NRG1Q02297 640 aaPredicted RBP12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 SIGLEC14Q08ET2 396 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TPRG1Q6ZUI0 275 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 SLFN11Q7Z7L1 901 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 KIAA1328Q86T90 577 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 SFTPA1Q8IWL2 248 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CFAP52Q8N1V2 620 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 LRRC57Q8N9N7 239 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 EZH1Q92800 747 aaPredicted RBP12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 C1orf74Q96LT6 269 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 SIK2Q9H0K1 926 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 OSBPL2Q9H1P3 480 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TMEM51Q9NW97 253 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ZNF212Q9UDV6 495 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 SLC12A6Q9UHW9 1150 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 FBXO10Q9UK96 956 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 VANGL2Q9ULK5 521 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 PYCARDQ9ULZ3 195 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 USP18Q9UMW8 372 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 AP4E1Q9UPM8 1137 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 PAXBP1Q9Y5B6 917 aa12.83□□□□□ -0.36
HLA-DQB1-203ENST00000399082 GRID2IPA4D2P6 1211 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 DRGXA6NNA5 263 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 E9PAM4 449 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TBL1XO60907 577 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TULP3O75386 442 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CNTN5O94779 1100 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 PDGFBP01127 241 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CISD3P0C7P0 127 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 RARAP10276 462 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 GLULP15104 373 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CD72P21854 359 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 COMTP21964 271 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 HOXC13P31276 330 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 NOP2P46087 812 aaKnown RBP12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 GAD2Q05329 585 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 SMTNL2Q2TAL5 461 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ANO4Q32M45 955 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ATP13A4Q4VNC1 1196 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 MPPE1Q53F39 396 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ALFQ53S48 1182 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 KCNT1Q5JUK3 1230 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 MPP7Q5T2T1 576 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 C11orf63Q6NUN7 778 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ZNF662Q6ZS27 426 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 RALGPS2Q86X27 583 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 SIX5Q8N196 739 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 NAT16Q8N8M0 369 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 OR52K2Q8NGK3 314 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TMA16Q96EY4 203 aaKnown RBP12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 LMLNQ96KR4 655 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 KCTD15Q96SI1 283 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 IRX2Q9BZI1 471 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 EPHX3Q9H6B9 360 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 C8orf33Q9H7E9 229 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 PPP2R2CQ9Y2T4 447 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CAPN6Q9Y6Q1 641 aa12.82□□□□□ -0.36
HLA-DQB1-203ENST00000399082 MACROD2A1Z1Q3 448 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 F5H5T6 163 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 PRPSAP2O60256 369 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 LRIG2O94898 1065 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 MOCS3O95396 460 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CCDC175P0C221 793 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 C7P10643 843 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 L1CAMP32004 1257 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ARSEP51690 589 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 AIF1P55008 147 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 STARD6P59095 220 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 PRKCQQ04759 706 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 KIF5AQ12840 1032 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 MTA1Q13330 715 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms