RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SMIM35A0A1B0GVV1 85 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 FGF10O15520 208 aaPredicted RBP14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 ENDOD1O94919 500 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 ADRA1DP25100 572 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 CDK7P50613 346 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 SCARA3Q6AZY7 606 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 NPNTQ6UXI9 565 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 SCUBE1Q8IWY4 988 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 VPS37AQ8NEZ2 397 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 DCLRE1BQ9H816 532 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 ATP13A1Q9HD20 1204 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 ENTPD7Q9NQZ7 604 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 CCDC15Q0P6D6 951 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 KYAT3Q6YP21 454 aaKnown RBP14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 APTXQ7Z2E3 356 aaKnown RBP14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 TMC7Q7Z402 723 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 PSTKQ8IV42 348 aaKnown RBP14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 LENG9Q96B70 501 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 RBBP8Q99708 897 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 PDGFDQ9GZP0 370 aaPredicted RBP14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 IL1RL2Q9HB29 575 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 ZNF214Q9UL59 606 aaPredicted RBP14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 PQBP1O60828 265 aaKnown RBP14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 CRABP2P29373 138 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 SERPINB5P36952 375 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 ENPEPQ07075 957 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 RCN1Q15293 331 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 CYTH1Q15438 398 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 SLC35G1Q2M3R5 365 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 PTPN20Q4JDL3 420 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 IQCKQ8N0W5 287 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 MYO1HQ8N1T3 1032 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 CKAP2Q8WWK9 683 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 TEX12Q9BXU0 123 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 BTBD7Q9P203 1132 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 EFR3BQ9Y2G0 817 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 USP12O75317 370 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 CSE1LP55060 971 aaKnown RBP14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 ZNF470Q6ECI4 717 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 CES3Q6UWW8 571 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 C12orf29Q8N999 325 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 PPP1R13LQ8WUF5 828 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 MARCH2Q9P0N8 246 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 CTNNAL1Q9UBT7 734 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 ST3GAL5Q9UNP4 418 aa14.56□□□□□ -0.08
PCDHGA11-201ENST00000398587 EVPLLA8MZ36 301 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 DDX3YO15523 660 aaKnown RBP14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 DARSP14868 501 aaKnown RBP14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 CDH2P19022 906 aaPredicted RBP14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 MATKP42679 507 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 RGMBQ6NW40 437 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 TDRD5Q8NAT2 981 aaKnown RBP14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 XPNPEP1Q9NQW7 623 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 COL1A1P02452 1464 aaPredicted RBP14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 PHLPP1O60346 1717 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 HOXB8P17481 243 aaPredicted RBP14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 PPP1R26Q5T8A7 1209 aaPredicted RBP14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 LCLAT1Q6UWP7 414 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 ADCK2Q7Z695 626 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 TOP6BLQ8N6T0 577 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 TBL1YQ9BQ87 522 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 IL22Q9GZX6 179 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 PRDM12Q9H4Q4 367 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 SLC25A13Q9UJS0 675 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 GIT1Q9Y2X7 761 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 PCDHB12Q9Y5F1 795 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 E9PBE3 544 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 KLHL41O60662 606 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 ATP4AP20648 1035 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 SLC1A6P48664 564 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 CYLC2Q14093 348 aaPredicted RBP14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 LRRC57Q8N9N7 239 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 JOSD2Q8TAC2 188 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 FAM136AQ96C01 138 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 PRPF18Q99633 342 aaKnown RBP14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 TCF7L2Q9NQB0 619 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 ATP11BQ9Y2G3 1177 aa14.55□□□□□ -0.08
PCDHGA11-201ENST00000398587 FCHO1O14526 889 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 CST3P01034 146 aaPredicted RBP14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 NUMBP49757 651 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 OCA2Q04671 838 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 MMRN1Q13201 1228 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 TTC30BQ8N4P2 665 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 CNGB3Q9NQW8 809 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 SALL4Q9UJQ4 1053 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 EIF3LQ9Y262 564 aaKnown RBP14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 PSMB4P28070 264 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 BNC2Q6ZN30 1099 aaPredicted RBP14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 ANKRD23Q86SG2 305 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 LGI2Q8N0V4 545 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 FNIP1Q8TF40 1166 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 UCMAQ8WVF2 138 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 SIKE1Q9BRV8 207 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 ATXN3LQ9H3M9 355 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 NXF3Q9H4D5 531 aaKnown RBP14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 NUDT5Q9UKK9 219 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 ACADSP16219 412 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 KCNA3P22001 575 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 KCNA4P22459 653 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 MRPS35P82673 323 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms