RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 MKRN2Q9H000 416 aaKnown RBP10.26□□□□□ -0.77
NIFKP1-201ENST00000398317 PRDM16Q9HAZ2 1276 aa10.26□□□□□ -0.77
NIFKP1-201ENST00000398317 THAP10Q9P2Z0 257 aaPredicted RBP10.26□□□□□ -0.77
NIFKP1-201ENST00000398317 STRIP2Q9ULQ0 834 aa10.26□□□□□ -0.77
NIFKP1-201ENST00000398317 SLC27A6Q9Y2P4 619 aa10.26□□□□□ -0.77
NIFKP1-201ENST00000398317 ANKRD11Q6UB99 2663 aaPredicted RBP10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 GOLGA4Q13439 2230 aaKnown RBP10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 PKD1L2Q7Z442 2459 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 UPK3BL1B0FP48 263 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 KCNJ18B7U540 433 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 UPK3BL2E5RIL1 263 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 SYNCRIPO60506 623 aaKnown RBP10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 TSPAN3O60637 253 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 ZBED1O96006 694 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 CYBBP04839 570 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 SYPP08247 313 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 CD59P13987 128 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 PRKCHP24723 683 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 CD6P30203 668 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 PRCPP42785 496 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 PDE4CQ08493 712 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 ZNF234Q14588 700 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 SYCP2LQ5T4T6 812 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 TCERG1LQ5VWI1 586 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 TMEM215Q68D42 235 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 BHLHA9Q7RTU4 235 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 ANKS1BQ7Z6G8 1248 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 RABEPKQ7Z6M1 372 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 CACUL1Q86Y37 369 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 TMPRSS6Q8IU80 811 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 FMNL3Q8IVF7 1028 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 TTC39CQ8N584 583 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 PLPP7Q8NBV4 271 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 UBA3Q8TBC4 463 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 UCMAQ8WVF2 138 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 ERCC4Q92889 916 aaPredicted RBP10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 GATA6Q92908 595 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 GPR174Q9BXC1 333 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 SCAND2PQ9GZW5 306 aaPredicted RBP10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 ALG2Q9H553 416 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 ELOVL2Q9NXB9 296 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 WSB2Q9NYS7 404 aaPredicted RBP10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 SFMBT1Q9UHJ3 866 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 KLK13Q9UKR3 277 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 TSPAN16Q9UKR8 245 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 NBEAQ8NFP9 2946 aa10.25□□□□□ -0.77
NIFKP1-201ENST00000398317 MEI4A8MW99 385 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 XPO1O14980 1071 aaKnown RBP10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 SH3BP5O60239 455 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 STX10O60499 249 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 NCAM1P13591 858 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 HLA-EP13747 358 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 CD19P15391 556 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 GNSP15586 552 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 TPMTP51580 245 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 PMS1P54277 932 aaKnown RBP10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 BCAT1P54687 386 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 SLC8A3P57103 927 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 ADIGQ0VDE8 80 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 LRMPQ12912 555 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 GRIK2Q13002 908 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 CUL2Q13617 745 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 ENPP2Q13822 863 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 TRIP4Q15650 581 aaPredicted RBP10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 SGO2Q562F6 1265 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 WDR45BQ5MNZ6 344 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 LCE2AQ5TA79 106 aaPredicted RBP10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 ANKRD40Q6AI12 368 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 PM20D1Q6GTS8 502 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 CPXM2Q8N436 756 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 CHCHD4Q8N4Q1 142 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 RBBP8NLQ8NC74 664 aaPredicted RBP10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 EDEM1Q92611 657 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 PLD4Q96BZ4 506 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 SIPA1Q96FS4 1042 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 FAXDC2Q96IV6 333 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 CIPCQ9C0C6 399 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 MIR1-1HGQ9H1L0 117 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 FAM124BQ9H5Z6 455 aaPredicted RBP10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 LRRC4Q9HBW1 653 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 ITM2CQ9NQX7 267 aa10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 DNAAF2Q9NVR5 837 aaKnown RBP10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 USP36Q9P275 1121 aaKnown RBP10.24□□□□□ -0.77
NIFKP1-201ENST00000398317 TMEM131Q92545 1883 aa10.23□□□□□ -0.77
NIFKP1-201ENST00000398317 PLXNB3Q9ULL4 1909 aa10.23□□□□□ -0.77
NIFKP1-201ENST00000398317 CELSR3Q9NYQ7 3312 aa10.23□□□□□ -0.77
NIFKP1-201ENST00000398317 TRIM49BA6NDI0 452 aa10.23□□□□□ -0.77
NIFKP1-201ENST00000398317 YJEFN3A6XGL0 299 aa10.23□□□□□ -0.77
NIFKP1-201ENST00000398317 E7ENQ6 273 aa10.23□□□□□ -0.77
NIFKP1-201ENST00000398317 PIK3R2O00459 728 aa10.23□□□□□ -0.77
NIFKP1-201ENST00000398317 NPC1O15118 1278 aa10.23□□□□□ -0.77
NIFKP1-201ENST00000398317 MSI1O43347 362 aaKnown RBP10.23□□□□□ -0.77
NIFKP1-201ENST00000398317 GJB3O75712 270 aa10.23□□□□□ -0.77
NIFKP1-201ENST00000398317 EPHX1P07099 455 aa10.23□□□□□ -0.77
NIFKP1-201ENST00000398317 LCP1P13796 627 aa10.23□□□□□ -0.77
NIFKP1-201ENST00000398317 RHOQP17081 205 aa10.23□□□□□ -0.77
NIFKP1-201ENST00000398317 HOXD9P28356 352 aaPredicted RBP10.23□□□□□ -0.77
NIFKP1-201ENST00000398317 SOX11P35716 441 aa10.23□□□□□ -0.77
NIFKP1-201ENST00000398317 HARS2P49590 506 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms