RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 TISP43B9A030 160 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 B9A039 149 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 DLL1O00548 723 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 MED7O43513 233 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 ZNF202O95125 648 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 GLP2RO95838 553 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 EEF1GP26641 437 aaKnown RBP3.97□□□□□ -1.77
UBE3A-202ENST00000397954 ACADSBP45954 432 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 RPL34P49207 117 aaKnown RBP3.97□□□□□ -1.77
UBE3A-202ENST00000397954 NLRP12P59046 1061 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 LILRA4P59901 499 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 TNNC1P63316 161 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 SRSF2Q01130 221 aaKnown RBP3.97□□□□□ -1.77
UBE3A-202ENST00000397954 CTBSQ01459 385 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 AGAP9Q5VTM2 703 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 PLPP4Q5VZY2 271 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 KRT39Q6A163 491 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 SLC39A4Q6P5W5 647 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 SYCE2Q6PIF2 218 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 DSTYKQ6XUX3 929 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 OVCH1Q7RTY7 1134 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 KCNK18Q7Z418 384 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 RALGPS2Q86X27 583 aaPredicted RBP3.97□□□□□ -1.77
UBE3A-202ENST00000397954 ZNF280BQ86YH2 543 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 PPIL6Q8IXY8 311 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 CYP4X1Q8N118 509 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 MSANTD4Q8NCY6 345 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 ANKRD20A12PQ8NF67 263 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 IRF7Q92985 503 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 TBC1D20Q96BZ9 403 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 CPB2Q96IY4 423 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 DDX50Q9BQ39 737 aaKnown RBP3.97□□□□□ -1.77
UBE3A-202ENST00000397954 NAT10Q9H0A0 1025 aaKnown RBP3.97□□□□□ -1.77
UBE3A-202ENST00000397954 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.97□□□□□ -1.777e-10■□□□□ 11.1
UBE3A-202ENST00000397954 CERS4Q9HA82 394 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 DMRT3Q9NQL9 472 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 ITM2CQ9NQX7 267 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 KRT82Q9NSB4 513 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 TOR4AQ9NXH8 423 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 TELO2Q9Y4R8 837 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 CCDC66A2RUB6 948 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 GRXCR1A8MXD5 290 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 LINC01387J3KSC0 135 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 TEX28O15482 410 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 POLR2DO15514 142 aaKnown RBP3.97□□□□□ -1.77
UBE3A-202ENST00000397954 PRPF6O94906 941 aaKnown RBP3.97□□□□□ -1.77
UBE3A-202ENST00000397954 OLFM2O95897 454 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 NR3C1P04150 777 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 THBDP07204 575 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 CNPP09543 421 aaKnown RBP3.97□□□□□ -1.77
UBE3A-202ENST00000397954 NUDT1P36639 197 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 MATR3P43243 847 aaKnown RBP eCLIP3.97□□□□□ -1.774e-6■■■■■ 30.9
UBE3A-202ENST00000397954 GRK6P43250 576 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 ERVFC1P60507 584 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 SLC7A9P82251 487 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 FCHO2Q0JRZ9 810 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 TMEM62Q0P6H9 643 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 BFSP1Q12934 665 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 TRPC3Q13507 836 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 HTR4Q13639 388 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 SLC9A5Q14940 896 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 TERF2Q15554 542 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 CTXN3Q4LDR2 81 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 TLDC1Q6P9B6 456 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 CD300LGQ6UXG3 332 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 CRELD2Q6UXH1 353 aaPredicted RBP3.97□□□□□ -1.77
UBE3A-202ENST00000397954 TBC1D1Q86TI0 1168 aaPredicted RBP3.97□□□□□ -1.77
UBE3A-202ENST00000397954 ADSSL1Q8N142 457 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 MIER2Q8N344 545 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 CELF5Q8N6W0 485 aaKnown RBP3.97□□□□□ -1.77
UBE3A-202ENST00000397954 MYCBPAPQ8TBZ2 947 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 CYB5D2Q8WUJ1 264 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 SCFD1Q8WVM8 642 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 SMARCD1Q96GM5 515 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 NT5C1BQ96P26 610 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 CLSTN3Q9BQT9 956 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 APOL6Q9BWW8 343 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 SLC2A11Q9BYW1 496 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 ZNF518BQ9C0D4 1074 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 TASP1Q9H6P5 420 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 PPARGC1AQ9UBK2 798 aaKnown RBP3.97□□□□□ -1.77
UBE3A-202ENST00000397954 PAXBP1Q9Y5B6 917 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 PCDHGB2Q9Y5G2 931 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 DDX49Q9Y6V7 483 aaKnown RBP3.97□□□□□ -1.77
UBE3A-202ENST00000397954 NOTCH4Q99466 2003 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 COL4A3Q01955 1670 aa3.97□□□□□ -1.77
UBE3A-202ENST00000397954 FAM227AF5H4B4 570 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 B4GALT5O43286 388 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 B3GAT3O94766 335 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 GFPT2O94808 682 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 ASS1P00966 412 aaKnown RBP3.96□□□□□ -1.77
UBE3A-202ENST00000397954 SCG5P05408 212 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 C8AP07357 584 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 PTX3P26022 381 aaPredicted RBP3.96□□□□□ -1.77
UBE3A-202ENST00000397954 HOXC12P31275 282 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 ROR1Q01973 937 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 SLBPQ14493 270 aaKnown RBP eCLIP3.96□□□□□ -1.77
UBE3A-202ENST00000397954 UAP1L1Q3KQV9 507 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 ANKRD39Q53RE8 183 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 ZNF667Q5HYK9 610 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms