RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 RFPL2O75678 378 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 EIF3EP60228 445 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 GUCY2DQ02846 1103 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 GBE1Q04446 702 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 PTK6Q13882 451 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 BRD3Q15059 726 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 MS4A13Q5J8X5 152 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 LEMD2Q8NC56 503 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 ZFRQ96KR1 1074 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 NACA2Q9H009 215 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 SIK2Q9H0K1 926 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 EPB41L5Q9HCM4 733 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 DTLQ9NZJ0 730 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 MFHAS1Q9Y4C4 1052 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 RAD54BQ9Y620 910 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 CCDC151A5D8V7 595 aa20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 SOBPA7XYQ1 873 aa20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 PER2O15055 1255 aa20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 STC2O76061 302 aa20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 MOCS2O96007 188 aaPredicted RBP20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 RBP3P10745 1247 aa20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 PTPN2P17706 415 aa20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 KCNQ1P51787 676 aa20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 C1orf228Q6PIY5 440 aa20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 ELMSAN1Q6PJG2 1045 aa20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 CCNI2Q6ZMN8 369 aaPredicted RBP20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 BZW1Q7L1Q6 419 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 CASKIN2Q8WXE0 1202 aa20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 MRPS31Q92665 395 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 TIFAQ96CG3 184 aa20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 TBC1D31Q96DN5 1066 aa20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 SLC22A12Q96S37 553 aa20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 CDCA3Q99618 268 aaPredicted RBP20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 CORO1BQ9BR76 489 aa20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 TLE6Q9H808 572 aa20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 PPARGC1AQ9UBK2 798 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 ZNF148Q9UQR1 794 aa20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 UTP11Q9Y3A2 253 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 HEY1Q9Y5J3 304 aa20.1■□□□□ 0.81
PDLIM2-205ENST00000397761 WASH4PA8MWX3 477 aa20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 E9PAM4 449 aa20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 MFSD11O43934 449 aa20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 XYLBO75191 536 aa20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 EPHB2P29323 1055 aa20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 GGCXP38435 758 aa20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 SLC7A9P82251 487 aa20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 CUL1Q13616 776 aa20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 LRIT3Q3SXY7 679 aa20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 C5orf22Q49AR2 442 aa20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 TXNDC8Q6A555 127 aa20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 NADSYN1Q6IA69 706 aa20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 TMCO3Q6UWJ1 677 aa20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 C14orf80Q86SX3 495 aa20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 ZNF707Q96C28 371 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 MRPL38Q96DV4 380 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 CCDC114Q96M63 670 aa20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 PRKD2Q9BZL6 878 aa20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 KLC2Q9H0B6 622 aa20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 HCFC1R1Q9NWW0 138 aa20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 DNMT3BQ9UBC3 853 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-205ENST00000397761 ESYT3A0FGR9 886 aa20.08■□□□□ 0.81
PDLIM2-205ENST00000397761 BCLAF3A2AJT9 711 aaKnown RBP20.08■□□□□ 0.81
PDLIM2-205ENST00000397761 SOX1O00570 391 aaPredicted RBP20.08■□□□□ 0.81
PDLIM2-205ENST00000397761 NRG2O14511 850 aaPredicted RBP20.08■□□□□ 0.81
PDLIM2-205ENST00000397761 DAPK3O43293 454 aa20.08■□□□□ 0.81
PDLIM2-205ENST00000397761 HMBSP08397 361 aa20.08■□□□□ 0.81
PDLIM2-205ENST00000397761 HDCP19113 662 aa20.08■□□□□ 0.81
PDLIM2-205ENST00000397761 IVDP26440 423 aa20.08■□□□□ 0.81
PDLIM2-205ENST00000397761 CCR2P41597 374 aa20.08■□□□□ 0.81
PDLIM2-205ENST00000397761 AUHQ13825 339 aaKnown RBP20.08■□□□□ 0.81
PDLIM2-205ENST00000397761 FBXO38Q6PIJ6 1188 aa20.08■□□□□ 0.81
PDLIM2-205ENST00000397761 PDZD4Q76G19 769 aaPredicted RBP20.08■□□□□ 0.81
PDLIM2-205ENST00000397761 SHKBP1Q8TBC3 707 aa20.08■□□□□ 0.81
PDLIM2-205ENST00000397761 HNRNPLLQ8WVV9 542 aaKnown RBP20.08■□□□□ 0.81
PDLIM2-205ENST00000397761 RTP4Q96DX8 246 aa20.08■□□□□ 0.81
PDLIM2-205ENST00000397761 TMEM121Q9BTD3 319 aa20.08■□□□□ 0.81
PDLIM2-205ENST00000397761 FAM114A2Q9NRY5 505 aa20.08■□□□□ 0.81
PDLIM2-205ENST00000397761 STOML2Q9UJZ1 356 aa20.08■□□□□ 0.81
PDLIM2-205ENST00000397761 CFAP69A5D8W1 941 aa20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 DRGXA6NNA5 263 aa20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 HACD1B0YJ81 288 aa20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 ACSL4O60488 711 aa20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 MOSPD3O75425 235 aa20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 LATS1O95835 1130 aa20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 KLKB1P03952 638 aa20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 MYL4P12829 197 aa20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 DDX6P26196 483 aaKnown RBP eCLIP20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 STIP1P31948 543 aaKnown RBP20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 NRIP1P48552 1158 aa20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 HARS2P49590 506 aaKnown RBP20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 CYP4F8P98187 520 aa20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 PPP1R7Q15435 360 aa20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 TRADDQ15628 312 aa20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 RBM23Q86U06 439 aaKnown RBP20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 NPWQ8N729 165 aa20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 ARL14EPQ8N8R7 260 aaPredicted RBP20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 ADAMTS19Q8TE59 1207 aa20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.07■□□□□ 0.84e-7■■■■■ 58.1
PDLIM2-205ENST00000397761 QKIQ96PU8 341 aaKnown RBP eCLIP20.07■□□□□ 0.8
PDLIM2-205ENST00000397761 GCNAQ96QF7 691 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms