RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ZNF302Q9NR11 478 aa5.6□□□□□ -1.51
PTPRD-205ENST00000397611 NXF1Q9UBU9 619 aaKnown RBP5.6□□□□□ -1.51
PTPRD-205ENST00000397611 TPST1O60507 370 aa5.6□□□□□ -1.51
PTPRD-205ENST00000397611 CILPO75339 1184 aa5.6□□□□□ -1.51
PTPRD-205ENST00000397611 SERPINE1P05121 402 aa5.6□□□□□ -1.51
PTPRD-205ENST00000397611 ZNF252P-AS1Q0IIN9 211 aa5.6□□□□□ -1.51
PTPRD-205ENST00000397611 TRIM60Q495X7 471 aa5.6□□□□□ -1.51
PTPRD-205ENST00000397611 NUP93Q8N1F7 819 aa5.6□□□□□ -1.51
PTPRD-205ENST00000397611 PTCD3Q96EY7 689 aaKnown RBP5.6□□□□□ -1.51
PTPRD-205ENST00000397611 RRN3Q9NYV6 651 aa5.6□□□□□ -1.51
PTPRD-205ENST00000397611 PRPF19Q9UMS4 504 aaKnown RBP5.6□□□□□ -1.51
PTPRD-205ENST00000397611 C1orf232A0A0U1RR37 186 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 SNNO75324 88 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-205ENST00000397611 CPA3P15088 417 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 NUMBP49757 651 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 BST1Q10588 318 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 PDAP1Q13442 181 aaKnown RBP5.59□□□□□ -1.51
PTPRD-205ENST00000397611 HERC3Q15034 1050 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 MAPK11Q15759 364 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 UGCGQ16739 394 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 ZNF699Q32M78 642 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 PLEKHG4Q58EX7 1191 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 ZFP1Q6P2D0 407 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 GOLM1Q8NBJ4 401 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 UCMAQ8WVF2 138 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 ATG4CQ96DT6 458 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 GCNAQ96QF7 691 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 ZC3H7BQ9UGR2 993 aaKnown RBP5.59□□□□□ -1.51
PTPRD-205ENST00000397611 SAC3D1A6NKF1 404 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 FAM159BA6NKW6 160 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 C2CD4BA6NLJ0 364 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 GCATO75600 419 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 CETPP11597 493 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 ANPEPP15144 967 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 CRHR1P34998 444 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 CAPSQ13938 189 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 UGP2Q16851 508 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 RIN3Q8TB24 985 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 SPATA18Q8TC71 538 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 RMND5BQ96G75 393 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-205ENST00000397611 TMEM79Q9BSE2 394 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 ACP6Q9NPH0 428 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 CAB39Q9Y376 341 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-205ENST00000397611 WNT10BO00744 389 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 XPOTO43592 962 aaKnown RBP5.59□□□□□ -1.51
PTPRD-205ENST00000397611 HBP1O60381 514 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 COL6A2P12110 1019 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 PMLP29590 882 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 ELK3P41970 407 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 CSE1LP55060 971 aaKnown RBP5.59□□□□□ -1.51
PTPRD-205ENST00000397611 CXCL9Q07325 125 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 TTC39BQ5VTQ0 682 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-205ENST00000397611 RSBN1Q5VWQ0 802 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-205ENST00000397611 SWSAP1Q6NVH7 229 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 STRADAQ7RTN6 431 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 OR5B17Q8NGF7 314 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 DIS3LQ8TF46 1054 aaKnown RBP5.59□□□□□ -1.51
PTPRD-205ENST00000397611 PARVBQ9HBI1 364 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 ARHGEF38Q9NXL2 777 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 SH3GLB1Q9Y371 365 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 C3orf70A6NLC5 250 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-205ENST00000397611 ALDH1A2O94788 518 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 TNFAIP8O95379 198 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 BPGMP07738 259 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 NLRP11P59045 1033 aaKnown RBP5.59□□□□□ -1.51
PTPRD-205ENST00000397611 TGFB2P61812 414 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 CREB5Q02930 508 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 AADACL2Q6P093 401 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 MTHFD1LQ6UB35 978 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 DSTYKQ6XUX3 929 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 DEFB107AQ8IZN7 70 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 RDH11Q8TC12 318 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 ANKRD36BP1Q96IX9 119 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 POP1Q99575 1024 aaKnown RBP5.59□□□□□ -1.51
PTPRD-205ENST00000397611 MIPEPQ99797 713 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 IL1RL2Q9HB29 575 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 NSMCE4AQ9NXX6 385 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 PLK2Q9NYY3 685 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 HESX1Q9UBX0 185 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 RBMX2Q9Y388 322 aaKnown RBP5.59□□□□□ -1.51
PTPRD-205ENST00000397611 C16orf96A6NNT2 1141 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 YDJCA8MPS7 323 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 H0Y626 953 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 PLIN3O60664 434 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 USP1O94782 785 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 GM2AP17900 193 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 POLD2P49005 469 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 RBP5P82980 135 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 ITGADQ13349 1161 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 NDUFAF2Q8N183 169 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 POU5F2Q8N7G0 328 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 ERLEC1Q96DZ1 483 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 ADPGKQ9BRR6 497 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 SEMA6AQ9H2E6 1030 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 POPDC2Q9HBU9 364 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 DNAJC16Q9Y2G8 782 aa5.59□□□□□ -1.51
PTPRD-205ENST00000397611 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.59□□□□□ -1.52
PTPRD-205ENST00000397611 KLHL33A6NCF5 533 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 FOXO6A8MYZ6 492 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 CFAP99D6REC4 459 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms