RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 FAM122AQ96E09 287 aa17.52■□□□□ 0.4
TSPAN4-205ENST00000397406 MYADMQ96S97 322 aa17.52■□□□□ 0.4
TSPAN4-205ENST00000397406 RCOR3Q9P2K3 495 aaPredicted RBP17.52■□□□□ 0.4
TSPAN4-205ENST00000397406 XPO7Q9UIA9 1087 aaKnown RBP17.52■□□□□ 0.4
TSPAN4-205ENST00000397406 SORCS3Q9UPU3 1222 aa17.52■□□□□ 0.4
TSPAN4-205ENST00000397406 MUC6Q6W4X9 2439 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 FAM72CH0Y354 149 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 MOCS2O96007 188 aaPredicted RBP17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 MBL2P11226 248 aaPredicted RBP17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 HDCP19113 662 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 DDX6P26196 483 aaKnown RBP eCLIP17.51■□□□□ 0.397e-7■■■■□ 24.1
TSPAN4-205ENST00000397406 TEAD2Q15562 447 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 ARTNQ5T4W7 220 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 FAM72AQ5TYM5 149 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 KAZNQ674X7 775 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 NUGGCQ68CJ6 796 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 FAM72DQ6L9T8 149 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 ADAT2Q7Z6V5 191 aaKnown RBP17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 FAM72BQ86X60 149 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 ATP6V0D2Q8N8Y2 350 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 SPATA4Q8NEY3 305 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 PRSS33Q8NF86 280 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 PLD4Q96BZ4 506 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 BTN2A3PQ96KV6 586 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 CSPG4P5Q96PW8 444 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 RNF157Q96PX1 679 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 SLC46A2Q9BY10 475 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 PIDD1Q9HB75 910 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 GKN1Q9NS71 199 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 CWC15Q9P013 229 aaKnown RBP17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 SNX10Q9Y5X0 201 aa17.51■□□□□ 0.39
TSPAN4-205ENST00000397406 TRAV19A0A0A6YYK7 116 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 SOBPA7XYQ1 873 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 STC2O76061 302 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 SLU7O95391 586 aaKnown RBP17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 GOT1P17174 413 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 SLC7A9P82251 487 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 ZXDBP98169 803 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 NRG1Q02297 640 aaPredicted RBP17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 ANKRD20A8PQ5CZ79 823 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 GPR158Q5T848 1215 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 PIK3R6Q5UE93 754 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 UNC45BQ8IWX7 931 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 FBXL6Q8N531 539 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 MNS1Q8NEH6 495 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 PCDH19Q8TAB3 1148 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 RSAD2Q8WXG1 361 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 AP1M1Q9BXS5 423 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 OR12D3Q9UGF7 316 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 NEU3Q9UQ49 428 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 CPQQ9Y646 472 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 HS3ST4Q9Y661 456 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 CLUHO75153 1309 aa17.5■□□□□ 0.39
TSPAN4-205ENST00000397406 CTAGE15A4D2H0 777 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 H3BRJ5 948 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 KRIT1O00522 736 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 ZNF197O14709 1029 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 TJP3O95049 919 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 CTAGE8P0CG41 777 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 GGCXP38435 758 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 ARL4AP40617 200 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 HCAR3P49019 387 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 ZNF135P52742 658 aaPredicted RBP17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 MLLT6P55198 1093 aaPredicted RBP17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 MTA1Q13330 715 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 DPYSQ14117 519 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 ARHGAP15Q53QZ3 475 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 MS4A13Q5J8X5 152 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 MANEALQ5VSG8 457 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 SLC9A4Q6AI14 798 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 POTEHQ6S545 545 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 BBS12Q6ZW61 710 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 CTAGE6Q86UF2 777 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 RFX6Q8HWS3 928 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 CTAGE4Q8IX94 777 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 PQLC3Q8N755 202 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 ST13P5Q8NFI4 369 aaPredicted RBP17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 MAIP1Q8WWC4 291 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 WBP2Q969T9 261 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 C1orf74Q96LT6 269 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 TASP1Q9H6P5 420 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 KCNK12Q9HB15 430 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 RBM12Q9NTZ6 932 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 SMPD4Q9NXE4 827 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 SLC12A6Q9UHW9 1150 aa17.49■□□□□ 0.39
TSPAN4-205ENST00000397406 EEF2KO00418 725 aaKnown RBP17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 CREB3O43889 395 aa17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 CST8O60676 142 aa17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 KLKB1P03952 638 aa17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 CKMP06732 381 aa17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 CEBPBP17676 345 aa17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 HOXD11P31277 338 aaPredicted RBP17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 C2orf54Q08AI8 447 aa17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 TFDP2Q14188 446 aa17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 NADSYN1Q6IA69 706 aa17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 OTOP3Q7RTS5 596 aa17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 ZNF683Q8IZ20 524 aa17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 PLCD3Q8N3E9 789 aa17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 PRELID2Q8N945 189 aa17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 ITFG1Q8TB96 612 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms