RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 USP27XA6NNY8 438 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 GOLGA8SH3BPF8 625 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 K7EQS6 105 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 PSTPIP1O43586 416 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 ZMPSTE24O75844 475 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 SDC4P31431 198 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 AVPR1AP37288 418 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 KLF1Q13351 362 aaPredicted RBP10.97□□□□□ -0.65
NUP98-205ENST00000397007 MEI1Q5TIA1 1274 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 ZNF783Q6ZMS7 281 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 TMEM25Q86YD3 366 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 KATNAL2Q8IYT4 538 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 PPM1EQ8WY54 764 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 TTC17Q96AE7 1141 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 HERPUD2Q9BSE4 406 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 ACE2Q9BYF1 805 aaPredicted RBP10.97□□□□□ -0.65
NUP98-205ENST00000397007 TKTL2Q9H0I9 626 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 DDIT4Q9NX09 232 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 USP18Q9UMW8 372 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 PCDHA3Q9Y5H8 950 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 ASGR2P07307 311 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 TACR2P21452 398 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 GJA4P35212 333 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 RUNX3Q13761 415 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 AUHQ13825 339 aaKnown RBP10.97□□□□□ -0.65
NUP98-205ENST00000397007 ADIPOR2Q86V24 386 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 ARHGAP12Q8IWW6 846 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 PQLC3Q8N755 202 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 FIBINQ8TAL6 211 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 NELL1Q92832 810 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 ATP2A3Q93084 1043 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 MRGPRX3Q96LB0 322 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.97□□□□□ -0.65
NUP98-205ENST00000397007 ANAPC7Q9UJX3 599 aa10.97□□□□□ -0.65
NUP98-205ENST00000397007 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.97□□□□□ -0.653e-6■■□□□ 12.8
NUP98-205ENST00000397007 PAPSS2O95340 614 aaPredicted RBP10.96□□□□□ -0.65
NUP98-205ENST00000397007 ABCB4P21439 1286 aa10.96□□□□□ -0.65
NUP98-205ENST00000397007 KIR2DL1P43626 348 aaPredicted RBP10.96□□□□□ -0.65
NUP98-205ENST00000397007 DPYSL3Q14195 570 aa10.96□□□□□ -0.65
NUP98-205ENST00000397007 ERMARDQ5T6L9 678 aa10.96□□□□□ -0.65
NUP98-205ENST00000397007 TRIM68Q6AZZ1 485 aa10.96□□□□□ -0.65
NUP98-205ENST00000397007 TXNDC11Q6PKC3 985 aa10.96□□□□□ -0.65
NUP98-205ENST00000397007 NYAP1Q6ZVC0 841 aa10.96□□□□□ -0.65
NUP98-205ENST00000397007 PHLDB2Q86SQ0 1253 aa10.96□□□□□ -0.65
NUP98-205ENST00000397007 SUGP1Q8IWZ8 645 aaKnown RBP10.96□□□□□ -0.65
NUP98-205ENST00000397007 GJD3Q8N144 294 aa10.96□□□□□ -0.65
NUP98-205ENST00000397007 CTNNBL1Q8WYA6 563 aaPredicted RBP10.96□□□□□ -0.65
NUP98-205ENST00000397007 NECAB3Q96P71 396 aaPredicted RBP10.96□□□□□ -0.65
NUP98-205ENST00000397007 OLFM3Q96PB7 478 aa10.96□□□□□ -0.65
NUP98-205ENST00000397007 INTS6Q9UL03 887 aaKnown RBP10.96□□□□□ -0.65
NUP98-205ENST00000397007 WNT6Q9Y6F9 365 aa10.96□□□□□ -0.65
NUP98-205ENST00000397007 ZNF821O75541 412 aaPredicted RBP10.96□□□□□ -0.65
NUP98-205ENST00000397007 GBP1P32455 592 aa10.96□□□□□ -0.65
NUP98-205ENST00000397007 PRKCQQ04759 706 aa10.96□□□□□ -0.65
NUP98-205ENST00000397007 DEUP1Q05D60 604 aa10.96□□□□□ -0.65
NUP98-205ENST00000397007 SIX1Q15475 284 aaPredicted RBP10.96□□□□□ -0.65
NUP98-205ENST00000397007 NAIF1Q69YI7 327 aaPredicted RBP10.96□□□□□ -0.65
NUP98-205ENST00000397007 FSTL4Q6MZW2 842 aa10.96□□□□□ -0.65
NUP98-205ENST00000397007 UMODL1-AS1Q8N2C9 162 aa10.96□□□□□ -0.65
NUP98-205ENST00000397007 PYROXD2Q8N2H3 581 aa10.96□□□□□ -0.65
NUP98-205ENST00000397007 TRMT61BQ9BVS5 477 aaKnown RBP10.96□□□□□ -0.65
NUP98-205ENST00000397007 FBRSL1Q9HCM7 1045 aaKnown RBP10.96□□□□□ -0.65
NUP98-205ENST00000397007 TRPC7Q9HCX4 862 aa10.96□□□□□ -0.65
NUP98-205ENST00000397007 ALG6Q9Y672 507 aa10.96□□□□□ -0.65
NUP98-205ENST00000397007 WDFY4Q6ZS81 3184 aa10.96□□□□□ -0.66
NUP98-205ENST00000397007 LRP4O75096 1905 aa10.96□□□□□ -0.66
NUP98-205ENST00000397007 E9PAM4 449 aa10.96□□□□□ -0.66
NUP98-205ENST00000397007 CKMP06732 381 aa10.96□□□□□ -0.66
NUP98-205ENST00000397007 RARAP10276 462 aa10.96□□□□□ -0.66
NUP98-205ENST00000397007 GRM2Q14416 872 aa10.96□□□□□ -0.66
NUP98-205ENST00000397007 PAFAH1B3Q15102 231 aaKnown RBP10.96□□□□□ -0.66
NUP98-205ENST00000397007 PTPRNQ16849 979 aa10.96□□□□□ -0.66
NUP98-205ENST00000397007 RALGPS2Q86X27 583 aaPredicted RBP10.96□□□□□ -0.66
NUP98-205ENST00000397007 CCAR2Q8N163 923 aaKnown RBP10.96□□□□□ -0.66
NUP98-205ENST00000397007 ZNF419Q96HQ0 510 aaPredicted RBP10.96□□□□□ -0.66
NUP98-205ENST00000397007 PCDH18Q9HCL0 1135 aa10.96□□□□□ -0.66
NUP98-205ENST00000397007 NDFIP2Q9NV92 336 aa10.96□□□□□ -0.66
NUP98-205ENST00000397007 DUS2Q9NX74 493 aaKnown RBP10.96□□□□□ -0.66
NUP98-205ENST00000397007 SLC9A3R1O14745 358 aaPredicted RBP10.95□□□□□ -0.66
NUP98-205ENST00000397007 HNRNPLP14866 589 aaKnown RBP eCLIP10.95□□□□□ -0.663e-19■■■■□ 21.2
NUP98-205ENST00000397007 IFRD2Q12894 506 aaPredicted RBP10.95□□□□□ -0.66
NUP98-205ENST00000397007 ALFQ53S48 1182 aa10.95□□□□□ -0.66
NUP98-205ENST00000397007 DENND1CQ8IV53 801 aa10.95□□□□□ -0.66
NUP98-205ENST00000397007 ALG3Q92685 438 aa10.95□□□□□ -0.66
NUP98-205ENST00000397007 ZNF670Q9BS34 389 aa10.95□□□□□ -0.66
NUP98-205ENST00000397007 TSGA10Q9BZW7 698 aa10.95□□□□□ -0.66
NUP98-205ENST00000397007 EFR3BQ9Y2G0 817 aa10.95□□□□□ -0.66
NUP98-205ENST00000397007 COMTP21964 271 aa10.95□□□□□ -0.66
NUP98-205ENST00000397007 GBP2P32456 591 aaPredicted RBP10.95□□□□□ -0.66
NUP98-205ENST00000397007 CTHP32929 405 aa10.95□□□□□ -0.66
NUP98-205ENST00000397007 CDKN2BP42772 138 aa10.95□□□□□ -0.66
NUP98-205ENST00000397007 MARCKSL1P49006 195 aa10.95□□□□□ -0.66
NUP98-205ENST00000397007 FSCBQ5H9T9 825 aa10.95□□□□□ -0.66
NUP98-205ENST00000397007 MIB1Q86YT6 1006 aa10.95□□□□□ -0.66
NUP98-205ENST00000397007 CCDC105Q8IYK2 499 aa10.95□□□□□ -0.66
NUP98-205ENST00000397007 ZFYVE19Q96K21 471 aa10.95□□□□□ -0.66
NUP98-205ENST00000397007 WDCPQ9H6R7 721 aa10.95□□□□□ -0.66
NUP98-205ENST00000397007 PRDM16Q9HAZ2 1276 aa10.95□□□□□ -0.66
NUP98-205ENST00000397007 CWC15Q9P013 229 aaKnown RBP10.95□□□□□ -0.66
NUP98-205ENST00000397007 SNX10Q9Y5X0 201 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms