RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 TMEM86AQ8N2M4 240 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 SENP6Q9GZR1 1112 aaPredicted RBP17.04■□□□□ 0.32
TRIM39-205ENST00000396551 ZFP69BQ9UJL9 534 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 CASTOR2A6NHX0 329 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 M0QZ92 97 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 DUSP11O75319 330 aaKnown RBP17.04■□□□□ 0.32
TRIM39-205ENST00000396551 TOP3BO95985 862 aaKnown RBP17.04■□□□□ 0.32
TRIM39-205ENST00000396551 IL1BP01584 269 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 ERCC2P18074 760 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 DSTYKQ6XUX3 929 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 CLNKQ7Z7G1 428 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 APBB2Q92870 758 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 NTAN1Q96AB6 310 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 SLC9A7Q96T83 725 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 GORASP1Q9BQQ3 440 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 MANSC4A6NHS7 340 aaPredicted RBP17.04■□□□□ 0.32
TRIM39-205ENST00000396551 SDR42E2A6NKP2 422 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 CAPN9O14815 690 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 KLF11O14901 512 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 TGDSO95455 350 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 DLDP09622 509 aaKnown RBP17.04■□□□□ 0.32
TRIM39-205ENST00000396551 NEFHP12036 1026 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 GTF2A1P52655 376 aaPredicted RBP17.04■□□□□ 0.32
TRIM39-205ENST00000396551 OLIG2Q13516 323 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 E2F5Q15329 346 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 PARP6Q2NL67 630 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 GNASQ5JWF2 1037 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 SPDYAQ5MJ70 313 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 CASC4Q6P4E1 433 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 AGAP11Q8TF27 550 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 RTP3Q9BQQ7 232 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 MTG1Q9BT17 334 aaPredicted RBP17.04■□□□□ 0.32
TRIM39-205ENST00000396551 CNGB3Q9NQW8 809 aa17.04■□□□□ 0.32
TRIM39-205ENST00000396551 TNPO2O14787 897 aaKnown RBP17.03■□□□□ 0.32
TRIM39-205ENST00000396551 PPP1R12AO14974 1030 aaPredicted RBP17.03■□□□□ 0.32
TRIM39-205ENST00000396551 STK10O94804 968 aaKnown RBP17.03■□□□□ 0.32
TRIM39-205ENST00000396551 SCAPQ12770 1279 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 WLSQ5T9L3 541 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 MARK2Q7KZI7 788 aaKnown RBP17.03■□□□□ 0.32
TRIM39-205ENST00000396551 CEP57Q86XR8 500 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 SOCS4Q8WXH5 440 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 TBC1D31Q96DN5 1066 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 TMEM120AQ9BXJ8 343 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 AGO3Q9H9G7 860 aaKnown RBP17.03■□□□□ 0.32
TRIM39-205ENST00000396551 SYBUQ9NX95 663 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 FBXW11Q9UKB1 542 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 COL4A4P53420 1690 aaPredicted RBP17.03■□□□□ 0.32
TRIM39-205ENST00000396551 SHROOM3Q8TF72 1996 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 I3L4J1 428 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 KCNK1O00180 336 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 SERPINB9P50453 376 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 MGAT3Q09327 533 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 PREPLQ4J6C6 727 aaPredicted RBP17.03■□□□□ 0.32
TRIM39-205ENST00000396551 TIGD5Q53EQ6 642 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 NDUFAF2Q8N183 169 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 PRR11Q96HE9 360 aaPredicted RBP17.03■□□□□ 0.32
TRIM39-205ENST00000396551 PGLYRP2Q96PD5 576 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 IGSF9Q9P2J2 1179 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 HEY2Q9UBP5 337 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 SNX10Q9Y5X0 201 aa17.03■□□□□ 0.32
TRIM39-205ENST00000396551 NUP205Q92621 2012 aa17.02■□□□□ 0.32
TRIM39-205ENST00000396551 C2orf71A6NGG8 1288 aa17.02■□□□□ 0.32
TRIM39-205ENST00000396551 PGK1P00558 417 aa17.02■□□□□ 0.32
TRIM39-205ENST00000396551 LTFP02788 710 aa17.02■□□□□ 0.32
TRIM39-205ENST00000396551 NCAM1P13591 858 aa17.02■□□□□ 0.32
TRIM39-205ENST00000396551 ARFIP2P53365 341 aa17.02■□□□□ 0.32
TRIM39-205ENST00000396551 BSPRYQ5W0U4 402 aa17.02■□□□□ 0.32
TRIM39-205ENST00000396551 TIFABQ6ZNK6 161 aa17.02■□□□□ 0.32
TRIM39-205ENST00000396551 IFNL1Q8IU54 200 aa17.02■□□□□ 0.32
TRIM39-205ENST00000396551 NPWQ8N729 165 aa17.02■□□□□ 0.32
TRIM39-205ENST00000396551 INPP5DQ92835 1189 aa17.02■□□□□ 0.32
TRIM39-205ENST00000396551 SIRPGQ9P1W8 387 aa17.02■□□□□ 0.32
TRIM39-205ENST00000396551 CDH9Q9ULB4 789 aa17.02■□□□□ 0.32
TRIM39-205ENST00000396551 SLC8A1P32418 973 aa17.02■□□□□ 0.32
TRIM39-205ENST00000396551 CRYMQ14894 314 aa17.02■□□□□ 0.32
TRIM39-205ENST00000396551 PGBD4Q96DM1 585 aa17.02■□□□□ 0.32
TRIM39-205ENST00000396551 PGAP3Q96FM1 320 aaPredicted RBP17.02■□□□□ 0.32
TRIM39-205ENST00000396551 CHST12Q9NRB3 414 aa17.02■□□□□ 0.32
TRIM39-205ENST00000396551 PTCH2Q9Y6C5 1203 aa17.02■□□□□ 0.32
TRIM39-205ENST00000396551 TDRD15B5MCY1 1934 aaKnown RBP17.02■□□□□ 0.31
TRIM39-205ENST00000396551 PTPN3P26045 913 aa17.02■□□□□ 0.31
TRIM39-205ENST00000396551 CRHR1P34998 444 aa17.02■□□□□ 0.31
TRIM39-205ENST00000396551 BST1Q10588 318 aa17.02■□□□□ 0.31
TRIM39-205ENST00000396551 UPP1Q16831 310 aa17.02■□□□□ 0.31
TRIM39-205ENST00000396551 EDEM1Q92611 657 aa17.02■□□□□ 0.31
TRIM39-205ENST00000396551 SKA1Q96BD8 255 aa17.02■□□□□ 0.31
TRIM39-205ENST00000396551 ZNF395Q9H8N7 513 aaPredicted RBP17.02■□□□□ 0.31
TRIM39-205ENST00000396551 DDIT4Q9NX09 232 aa17.02■□□□□ 0.31
TRIM39-205ENST00000396551 L3MBTL1Q9Y468 752 aa17.02■□□□□ 0.31
TRIM39-205ENST00000396551 PSAT1Q9Y617 370 aa17.02■□□□□ 0.31
TRIM39-205ENST00000396551 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.01■□□□□ 0.31
TRIM39-205ENST00000396551 PGAM1P18669 254 aa17.01■□□□□ 0.31
TRIM39-205ENST00000396551 AIF1P55008 147 aa17.01■□□□□ 0.31
TRIM39-205ENST00000396551 TPI1P60174 286 aa17.01■□□□□ 0.31
TRIM39-205ENST00000396551 SMAD1Q15797 465 aaKnown RBP17.01■□□□□ 0.31
TRIM39-205ENST00000396551 TEX44Q53QW1 395 aa17.01■□□□□ 0.31
TRIM39-205ENST00000396551 PACS1Q6VY07 963 aa17.01■□□□□ 0.31
TRIM39-205ENST00000396551 PID1Q7Z2X4 250 aa17.01■□□□□ 0.31
TRIM39-205ENST00000396551 SERINC5Q86VE9 423 aa17.01■□□□□ 0.31
TRIM39-205ENST00000396551 MYLPFQ96A32 169 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms