RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 NLRP14Q86W24 1093 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 CCDC89Q8N998 374 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 EPAS1Q99814 870 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 ENTPD7Q9NQZ7 604 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 ZNF212Q9UDV6 495 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 DNMT3LQ9UJW3 386 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 FARP1Q9Y4F1 1045 aaPredicted RBP13.12□□□□□ -0.31
TRIM39-204ENST00000396548 C2orf78A6NCI8 922 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 H3BNC9 293 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 PAPLNO95428 1278 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 RPL22P35268 128 aaKnown RBP13.12□□□□□ -0.31
TRIM39-204ENST00000396548 GGCXP38435 758 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 HSPA9P38646 679 aaKnown RBP13.12□□□□□ -0.31
TRIM39-204ENST00000396548 PBX2P40425 430 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 NRLP54845 237 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 SLC45A4Q5BKX6 768 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 HECTD3Q5T447 861 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 NADSYN1Q6IA69 706 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 TSEN2Q8NCE0 465 aaKnown RBP13.12□□□□□ -0.31
TRIM39-204ENST00000396548 KREMEN2Q8NCW0 462 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 CCHCR1Q8TD31 782 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 RNF34Q969K3 372 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 BTN2A3PQ96KV6 586 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 KLF16Q9BXK1 252 aaPredicted RBP13.12□□□□□ -0.31
TRIM39-204ENST00000396548 PPARGC1AQ9UBK2 798 aaKnown RBP13.12□□□□□ -0.31
TRIM39-204ENST00000396548 UXTQ9UBK9 157 aaPredicted RBP13.12□□□□□ -0.31
TRIM39-204ENST00000396548 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.12□□□□□ -0.31
TRIM39-204ENST00000396548 HACD1B0YJ81 288 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 E9PAM4 449 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 VAV1P15498 845 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 RBL1P28749 1068 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 ATP5C1P36542 298 aaKnown RBP13.12□□□□□ -0.31
TRIM39-204ENST00000396548 KPNA1P52294 538 aaPredicted RBP13.12□□□□□ -0.31
TRIM39-204ENST00000396548 CASP8Q14790 479 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 VEPH1Q14D04 833 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 FAM71DQ8N9W8 422 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 ZNF512Q96ME7 567 aaPredicted RBP13.12□□□□□ -0.31
TRIM39-204ENST00000396548 TGS1Q96RS0 853 aaKnown RBP13.12□□□□□ -0.31
TRIM39-204ENST00000396548 TRPM5Q9NZQ8 1165 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 CHD5Q8TDI0 1954 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 SLC12A8A0AV02 714 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 DRGXA6NNA5 263 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 SGK1O00141 431 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 DNALI1O14645 258 aaPredicted RBP13.11□□□□□ -0.31
TRIM39-204ENST00000396548 GREM1O60565 184 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 CLASP2O75122 1294 aaKnown RBP13.11□□□□□ -0.31
TRIM39-204ENST00000396548 MAP3K6O95382 1288 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 GLIPR1L2Q4G1C9 344 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 RNASEH2BQ5TBB1 312 aaKnown RBP13.11□□□□□ -0.31
TRIM39-204ENST00000396548 DARS2Q6PI48 645 aaKnown RBP13.11□□□□□ -0.31
TRIM39-204ENST00000396548 CCDC149Q6ZUS6 474 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 GAREM2Q75VX8 874 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 GSTA5Q7RTV2 222 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 TADA2BQ86TJ2 420 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 ITIH5Q86UX2 942 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 MIB1Q86YT6 1006 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 ZSCAN18Q8TBC5 510 aaPredicted RBP13.11□□□□□ -0.31
TRIM39-204ENST00000396548 LRRN4Q8WUT4 740 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 PPFIA2O75334 1257 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 C8AP07357 584 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 KCNQ1P51787 676 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 ITGA8P53708 1063 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 GALNT2Q10471 571 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 CBLBQ13191 982 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 P3H1Q32P28 736 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 HDXQ7Z353 690 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 TMC3Q7Z5M5 1100 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 ARHGAP12Q8IWW6 846 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 ADAMTS19Q8TE59 1207 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 AZIN2Q96A70 460 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 MYEOVQ96EZ4 313 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 GDAP1L1Q96MZ0 367 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 VIPAS39Q9H9C1 493 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 ASIC3Q9UHC3 531 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 NR2E3Q9Y5X4 410 aa13.11□□□□□ -0.31
TRIM39-204ENST00000396548 CFAP69A5D8W1 941 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 FGF10O15520 208 aaPredicted RBP13.1□□□□□ -0.31
TRIM39-204ENST00000396548 GLUD1P00367 558 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 ADCY8P40145 1251 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 EPHA5P54756 1037 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 PLTPP55058 493 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 ACBD5Q5T8D3 534 aaPredicted RBP13.1□□□□□ -0.31
TRIM39-204ENST00000396548 HS6ST3Q8IZP7 471 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 ATP6V0D2Q8N8Y2 350 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 TBC1D31Q96DN5 1066 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 PBX4Q9BYU1 374 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 HPCAL4Q9UM19 191 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 GCATO75600 419 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 EPHB2P29323 1055 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 IRAK1P51617 712 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 ZXDBP98169 803 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 AUHQ13825 339 aaKnown RBP13.1□□□□□ -0.31
TRIM39-204ENST00000396548 UAP1Q16222 522 aaPredicted RBP13.1□□□□□ -0.31
TRIM39-204ENST00000396548 PDE12Q6L8Q7 609 aaKnown RBP13.1□□□□□ -0.31
TRIM39-204ENST00000396548 BZW1Q7L1Q6 419 aaKnown RBP13.1□□□□□ -0.31
TRIM39-204ENST00000396548 CDKL3Q8IVW4 592 aaPredicted RBP13.1□□□□□ -0.31
TRIM39-204ENST00000396548 NETO2Q8NC67 525 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 WBP2Q969T9 261 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 FMO2Q99518 471 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 SIK2Q9H0K1 926 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms