RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 NRLP54845 237 aa10.61□□□□□ -0.71
TUBB-208ENST00000396389 BTG3Q14201 252 aaPredicted RBP10.61□□□□□ -0.71
TUBB-208ENST00000396389 C9orf57Q5W0N0 161 aa10.61□□□□□ -0.71
TUBB-208ENST00000396389 PAOXQ6QHF9 649 aa10.61□□□□□ -0.71
TUBB-208ENST00000396389 ALKAL1Q6UXT8 129 aa10.61□□□□□ -0.71
TUBB-208ENST00000396389 RNF111Q6ZNA4 994 aa10.61□□□□□ -0.71
TUBB-208ENST00000396389 ZNF598Q86UK7 904 aaKnown RBP10.61□□□□□ -0.71
TUBB-208ENST00000396389 ZCCHC9Q8N567 271 aaKnown RBP10.61□□□□□ -0.71
TUBB-208ENST00000396389 CCDC89Q8N998 374 aa10.61□□□□□ -0.71
TUBB-208ENST00000396389 PGBD4Q96DM1 585 aa10.61□□□□□ -0.71
TUBB-208ENST00000396389 NT5C1BQ96P26 610 aa10.61□□□□□ -0.71
TUBB-208ENST00000396389 FAM192AQ9GZU8 254 aa10.61□□□□□ -0.71
TUBB-208ENST00000396389 VCX3BQ9H321 246 aa10.61□□□□□ -0.71
TUBB-208ENST00000396389 VCX3AQ9NNX9 186 aa10.61□□□□□ -0.71
TUBB-208ENST00000396389 CNTN3Q9P232 1028 aa10.61□□□□□ -0.71
TUBB-208ENST00000396389 GTF3C4Q9UKN8 822 aa10.61□□□□□ -0.71
TUBB-208ENST00000396389 SMG5Q9UPR3 1016 aaKnown RBP10.61□□□□□ -0.71
TUBB-208ENST00000396389 MUC3AQ02505 3323 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 TRIP11Q15643 1979 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 CCDC195A0A1B0GUA6 201 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 KLRC2P26717 231 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 PSMC1P62191 440 aaKnown RBP10.6□□□□□ -0.71
TUBB-208ENST00000396389 PLCB3Q01970 1234 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 DLG1Q12959 904 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 SHHQ15465 462 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 HSF5Q4G112 596 aaPredicted RBP10.6□□□□□ -0.71
TUBB-208ENST00000396389 C1orf146Q5VVC0 180 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 RGS9BPQ6ZS82 235 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 CEP128Q6ZU80 1094 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 MARK2Q7KZI7 788 aaKnown RBP10.6□□□□□ -0.71
TUBB-208ENST00000396389 RASSF3Q86WH2 238 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 FAM71AQ8IYT1 594 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 C12orf29Q8N999 325 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 GRK7Q8WTQ7 553 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 OSBPL8Q9BZF1 889 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 ASB7Q9H672 318 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 TMEM161AQ9NX61 479 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 PPARGC1AQ9UBK2 798 aaKnown RBP10.6□□□□□ -0.71
TUBB-208ENST00000396389 SLC7A8Q9UHI5 535 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 TRIOO75962 3097 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 CXCL10P02778 98 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 DLDP09622 509 aaKnown RBP10.6□□□□□ -0.71
TUBB-208ENST00000396389 VAV1P15498 845 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 CDK16Q00536 496 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 PCBP1Q15365 356 aaKnown RBP eCLIP10.6□□□□□ -0.713e-18■■■□□ 14.7
TUBB-208ENST00000396389 ZNF667Q5HYK9 610 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 TMEM240Q5SV17 173 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 NAT14Q8WUY8 206 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 AUTS2Q8WXX7 1259 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 SKA1Q96BD8 255 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 OXNAD1Q96HP4 312 aaPredicted RBP10.6□□□□□ -0.71
TUBB-208ENST00000396389 PPP1R10Q96QC0 940 aaKnown RBP10.6□□□□□ -0.71
TUBB-208ENST00000396389 MRPL45Q9BRJ2 306 aaKnown RBP10.6□□□□□ -0.71
TUBB-208ENST00000396389 TMEM121Q9BTD3 319 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 SDCBP2Q9H190 292 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 XYLT2Q9H1B5 865 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 IL23AQ9NPF7 189 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 FAM49BQ9NUQ9 324 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 NDE1Q9NXR1 346 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 UBQLN1Q9UMX0 589 aaKnown RBP10.6□□□□□ -0.71
TUBB-208ENST00000396389 PCDHB4Q9Y5E5 795 aa10.6□□□□□ -0.71
TUBB-208ENST00000396389 RPLP2P05387 115 aaKnown RBP10.59□□□□□ -0.71
TUBB-208ENST00000396389 CD19P15391 556 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 LMO2P25791 158 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 PBX2P40425 430 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 KLF1Q13351 362 aaPredicted RBP10.59□□□□□ -0.71
TUBB-208ENST00000396389 ANKRD22Q5VYY1 191 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 SCUBE1Q8IWY4 988 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 OR6B3Q8NGW1 331 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 CCDC124Q96CT7 223 aaKnown RBP10.59□□□□□ -0.71
TUBB-208ENST00000396389 CASD1Q96PB1 797 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 PACSIN3Q9UKS6 424 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 HEMK1Q9Y5R4 338 aaPredicted RBP10.59□□□□□ -0.71
TUBB-208ENST00000396389 MTA2O94776 668 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 OR4Q2P0C623 313 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 GZMAP12544 262 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 ALDH18A1P54886 795 aaKnown RBP10.59□□□□□ -0.71
TUBB-208ENST00000396389 AQP4P55087 323 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 LILRA4P59901 499 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 SLC25A3Q00325 362 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 CAV1Q03135 178 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 FNBP1LQ5T0N5 605 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 WSCD1Q658N2 575 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 C15orf39Q6ZRI6 1047 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 C3orf62Q6ZUJ4 267 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 ULK2Q8IYT8 1036 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 POU5F2Q8N7G0 328 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 STKLD1Q8NE28 680 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 URGCPQ8TCY9 931 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 PLEKHG4BQ96PX9 1271 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 TWNKQ96RR1 684 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 CENPKQ9BS16 269 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 PLVAPQ9BX97 442 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 IRF2BPLQ9H1B7 796 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 DPEP3Q9H4B8 488 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 NRDE2Q9H7Z3 1164 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 GIT1Q9Y2X7 761 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 SLC4A7Q9Y6M7 1214 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 CLUHO75153 1309 aa10.59□□□□□ -0.71
TUBB-208ENST00000396389 ARHGAP42A6NI28 874 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms