RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 FSTL4Q6MZW2 842 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 KLHDC10Q6PID8 442 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 PAQR9Q6ZVX9 377 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 UBE3DQ7Z6J8 389 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 WDR5BQ86VZ2 330 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 LONP2Q86WA8 852 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 FAM186BQ8IYM0 893 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 NUP93Q8N1F7 819 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 CAMKK1Q8N5S9 505 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 STKLD1Q8NE28 680 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 PSMG3-AS1Q96PY0 264 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 HNRNPABQ99729 332 aaKnown RBP6.48□□□□□ -1.37
PTPN20-208ENST00000395727 DNAI2Q9GZS0 605 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 SDCBP2Q9H190 292 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 DPEP3Q9H4B8 488 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 SMYD3Q9H7B4 428 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 TMEM8AQ9HCN3 771 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 PCOLCE2Q9UKZ9 415 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 SMG5Q9UPR3 1016 aaKnown RBP6.48□□□□□ -1.37
PTPN20-208ENST00000395727 COQ4Q9Y3A0 265 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 GVINP1Q7Z2Y8 2422 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 ZNF638Q14966 1978 aaKnown RBP6.48□□□□□ -1.37
PTPN20-208ENST00000395727 MYO15AQ9UKN7 3530 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 ZNF292O60281 2723 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 USP34Q70CQ2 3546 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 E2F8A0AVK6 867 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 PRAMEF27A3QJZ7 478 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 LEFTY2O00292 366 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 PMM2O15305 246 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 KRT13P13646 458 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 ARSAP15289 507 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 SDHBP21912 280 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 IFNAR2P48551 515 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 NDST1P52848 882 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 SLC5A3P53794 718 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 CDH8P55286 799 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 ZXDBP98169 803 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 SATB1Q01826 763 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 PPP3CAQ08209 521 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 TAF10Q12962 218 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 ADAM9Q13443 819 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 HSF5Q4G112 596 aaPredicted RBP6.47□□□□□ -1.37
PTPN20-208ENST00000395727 ZNF394Q53GI3 561 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 ZNF658Q5TYW1 1059 aaPredicted RBP6.47□□□□□ -1.37
PTPN20-208ENST00000395727 TRIM68Q6AZZ1 485 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 Q6ZS52 159 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 SYT13Q7L8C5 426 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 ZAR1Q86SH2 424 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 ZDHHC13Q8IUH4 622 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 SHISA5Q8N114 240 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 ARL14EPQ8N8R7 260 aaPredicted RBP6.47□□□□□ -1.37
PTPN20-208ENST00000395727 FBXL13Q8NEE6 735 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 ZMIZ2Q8NF64 920 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 TAS1R2Q8TE23 839 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 SH3RF2Q8TEC5 729 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 CD101Q93033 1021 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 SECISBP2LQ93073 1101 aaKnown RBP6.47□□□□□ -1.37
PTPN20-208ENST00000395727 LOXL4Q96JB6 756 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 CHAMP1Q96JM3 812 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 CYP2S1Q96SQ9 504 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 P2RY13Q9BPV8 354 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 NT5C1AQ9BXI3 368 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 FBXO44Q9H4M3 255 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 EBF3Q9H4W6 596 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 TRPC7Q9HCX4 862 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 DUS2Q9NX74 493 aaKnown RBP6.47□□□□□ -1.37
PTPN20-208ENST00000395727 DLL3Q9NYJ7 618 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 TBC1D14Q9P2M4 693 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 HOOK1Q9UJC3 728 aaKnown RBP6.47□□□□□ -1.37
PTPN20-208ENST00000395727 PCDHA5Q9Y5H7 936 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 OTOGLQ3ZCN5 2332 aa6.47□□□□□ -1.37
PTPN20-208ENST00000395727 CACNA1IQ9P0X4 2223 aa6.46□□□□□ -1.37
PTPN20-208ENST00000395727 HHLA1C9JL84 531 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 CLDN5O00501 218 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 CETN3O15182 167 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 SMC2O95347 1197 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 CYP17A1P05093 508 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 F13BP05160 661 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 RETP07949 1114 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 FAM200BP0CF97 657 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 TRIM49P0CI25 452 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 TRIM49CP0CI26 452 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 EPB41P11171 864 aaKnown RBP6.46□□□□□ -1.38
PTPN20-208ENST00000395727 TGM1P22735 817 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 OPRD1P41143 372 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 RAP1GAPP47736 663 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 ID4P47928 161 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 MXI1P50539 228 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 CDR1P51861 262 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 RACK1P63244 317 aaKnown RBP6.46□□□□□ -1.38
PTPN20-208ENST00000395727 FKBP3Q00688 224 aaKnown RBP6.46□□□□□ -1.38
PTPN20-208ENST00000395727 PNOCQ13519 176 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 MPP2Q14168 576 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 GAB4Q2WGN9 574 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 HECTD3Q5T447 861 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 TSSK4Q6SA08 328 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 SCARA5Q6ZMJ2 495 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 CLEC20AQ6ZU45 233 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 CCDC186Q7Z3E2 898 aa6.46□□□□□ -1.38
PTPN20-208ENST00000395727 ACOT1Q86TX2 421 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms