RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 TSC1Q92574 1164 aa16.5■□□□□ 0.23
SNCA-205ENST00000394991 ULBP1Q9BZM6 244 aa16.5■□□□□ 0.23
SNCA-205ENST00000394991 IMPG2Q9BZV3 1241 aa16.5■□□□□ 0.23
SNCA-205ENST00000394991 NRSN2Q9GZP1 204 aa16.5■□□□□ 0.23
SNCA-205ENST00000394991 RSPH9Q9H1X1 276 aaPredicted RBP16.5■□□□□ 0.23
SNCA-205ENST00000394991 A0A1W2PR77 199 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 PDXKO00764 312 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 YEATS4O95619 227 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 ITGAVP06756 1048 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 C1SP09871 688 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 HARS2P49590 506 aaKnown RBP16.49■□□□□ 0.23
SNCA-205ENST00000394991 VAMP7P51809 220 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 TKTL1P51854 596 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 GALCP54803 685 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 KCNJ12Q14500 433 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 PM20D1Q6GTS8 502 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 NCEH1Q6PIU2 408 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 USP30Q70CQ3 517 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 EID2Q8N6I1 236 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 SLC4A11Q8NBS3 891 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 LSM14AQ8ND56 463 aaKnown RBP16.49■□□□□ 0.23
SNCA-205ENST00000394991 GOLGA1Q92805 767 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 TMA16Q96EY4 203 aaKnown RBP16.49■□□□□ 0.23
SNCA-205ENST00000394991 HEXIM2Q96MH2 286 aaKnown RBP16.49■□□□□ 0.23
SNCA-205ENST00000394991 UBXN6Q9BZV1 441 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 FBXL12Q9NXK8 326 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 SFMBT1Q9UHJ3 866 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 HBS1LQ9Y450 684 aaKnown RBP16.49■□□□□ 0.23
SNCA-205ENST00000394991 ATMQ13315 3056 aa16.49■□□□□ 0.23
SNCA-205ENST00000394991 CYSRT1A8MQ03 144 aa16.48■□□□□ 0.23
SNCA-205ENST00000394991 RRP8O43159 456 aaKnown RBP16.48■□□□□ 0.23
SNCA-205ENST00000394991 MSI1O43347 362 aaKnown RBP16.48■□□□□ 0.23
SNCA-205ENST00000394991 ZBED1O96006 694 aa16.48■□□□□ 0.23
SNCA-205ENST00000394991 ABCB4P21439 1286 aa16.48■□□□□ 0.23
SNCA-205ENST00000394991 EPHA8P29322 1005 aaPredicted RBP16.48■□□□□ 0.23
SNCA-205ENST00000394991 RAD23BP54727 409 aa16.48■□□□□ 0.23
SNCA-205ENST00000394991 ADGRF1Q5T601 910 aa16.48■□□□□ 0.23
SNCA-205ENST00000394991 ZNF605Q86T29 641 aa16.48■□□□□ 0.23
SNCA-205ENST00000394991 GANCQ8TET4 914 aa16.48■□□□□ 0.23
SNCA-205ENST00000394991 EDEM1Q92611 657 aa16.48■□□□□ 0.23
SNCA-205ENST00000394991 LMLNQ96KR4 655 aa16.48■□□□□ 0.23
SNCA-205ENST00000394991 MMRN2Q9H8L6 949 aa16.48■□□□□ 0.23
SNCA-205ENST00000394991 FOXD4L1Q9NU39 408 aa16.48■□□□□ 0.23
SNCA-205ENST00000394991 SUN2Q9UH99 717 aa16.48■□□□□ 0.23
SNCA-205ENST00000394991 NCKAP1Q9Y2A7 1128 aa16.48■□□□□ 0.23
SNCA-205ENST00000394991 TDRD6O60522 2096 aaKnown RBP16.48■□□□□ 0.23
SNCA-205ENST00000394991 A0A1W2PP55 124 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 MID1O15344 667 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 BRINP1O60477 761 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 SIN3BO75182 1162 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 LATS1O95835 1130 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 ATP5BP06576 529 aaKnown RBP16.47■□□□□ 0.23
SNCA-205ENST00000394991 CDK4P11802 303 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 POLR2EP19388 210 aaKnown RBP16.47■□□□□ 0.23
SNCA-205ENST00000394991 ZNF445P59923 1031 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 BNIP3Q12983 259 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 KMT5BQ4FZB7 885 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 ARHGAP17Q68EM7 881 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 RFWD3Q6PCD5 774 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 KANSL1Q7Z3B3 1105 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 GPR155Q7Z3F1 870 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 BAP1Q92560 729 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 SEMA4DQ92854 862 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 MRGPRX3Q96LB0 322 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 NEUROG2Q9H2A3 272 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 AASDHPPTQ9NRN7 309 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 OLA1Q9NTK5 396 aaKnown RBP16.47■□□□□ 0.23
SNCA-205ENST00000394991 EXOC1Q9NV70 894 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 SERTAD1Q9UHV2 236 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 FRMD4BQ9Y2L6 1034 aa16.47■□□□□ 0.23
SNCA-205ENST00000394991 GOLGA6L7A0A1B0GV03 622 aa16.46■□□□□ 0.23
SNCA-205ENST00000394991 MAPK13O15264 365 aa16.46■□□□□ 0.23
SNCA-205ENST00000394991 TBL1XO60907 577 aa16.46■□□□□ 0.23
SNCA-205ENST00000394991 PDIA4P13667 645 aaKnown RBP16.46■□□□□ 0.23
SNCA-205ENST00000394991 CD38P28907 300 aa16.46■□□□□ 0.23
SNCA-205ENST00000394991 SLC6A4P31645 630 aa16.46■□□□□ 0.23
SNCA-205ENST00000394991 TLE3Q04726 772 aa16.46■□□□□ 0.23
SNCA-205ENST00000394991 CST6Q15828 149 aa16.46■□□□□ 0.23
SNCA-205ENST00000394991 SFMBT2Q5VUG0 894 aa16.46■□□□□ 0.23
SNCA-205ENST00000394991 RESP18Q5W5W9 173 aa16.46■□□□□ 0.23
SNCA-205ENST00000394991 DHX40Q8IX18 779 aaKnown RBP16.46■□□□□ 0.23
SNCA-205ENST00000394991 ANKRD52Q8NB46 1076 aa16.46■□□□□ 0.23
SNCA-205ENST00000394991 OR2T34Q8NGX1 318 aa16.46■□□□□ 0.23
SNCA-205ENST00000394991 TATDN2Q93075 761 aa16.46■□□□□ 0.23
SNCA-205ENST00000394991 TMEM176AQ96HP8 235 aa16.46■□□□□ 0.23
SNCA-205ENST00000394991 ZNF396Q96N95 335 aaPredicted RBP16.46■□□□□ 0.23
SNCA-205ENST00000394991 GDF3Q9NR23 364 aa16.46■□□□□ 0.23
SNCA-205ENST00000394991 CISHQ9NSE2 258 aa16.46■□□□□ 0.23
SNCA-205ENST00000394991 INTS6Q9UL03 887 aaKnown RBP16.46■□□□□ 0.23
SNCA-205ENST00000394991 SCML1Q9UN30 329 aa16.46■□□□□ 0.23
SNCA-205ENST00000394991 TRAF3IP3Q9Y228 551 aa16.46■□□□□ 0.23
SNCA-205ENST00000394991 TEX51A0A1B0GUA7 166 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 YJEFN3A6XGL0 299 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 E7ENQ6 273 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 YKT6O15498 198 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 ACTN4O43707 911 aaKnown RBP16.45■□□□□ 0.22
SNCA-205ENST00000394991 NXPH1P58417 271 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 CFHR1Q03591 330 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 ADIGQ0VDE8 80 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 CCDC173Q0VFZ6 552 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms