RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 AUHQ13825 339 aaKnown RBP20.61■□□□□ 0.89
SNCA-203ENST00000394986 C10orf76Q5T2E6 689 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 EMC10Q5UCC4 262 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 STRADAQ7RTN6 431 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 SPC24Q8NBT2 197 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 CCDC42Q96M95 316 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 VANGL2Q9ULK5 521 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 SCINQ9Y6U3 715 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 MIA3Q5JRA6 1907 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 TMEM191CA6NGB0 347 aa20.6■□□□□ 0.89
SNCA-203ENST00000394986 GALR2O43603 387 aaPredicted RBP20.6■□□□□ 0.89
SNCA-203ENST00000394986 MAGEA9P43362 315 aa20.6■□□□□ 0.89
SNCA-203ENST00000394986 GALCP54803 685 aa20.6■□□□□ 0.89
SNCA-203ENST00000394986 GEN1Q17RS7 908 aa20.6■□□□□ 0.89
SNCA-203ENST00000394986 C2orf27AQ580R0 203 aa20.6■□□□□ 0.89
SNCA-203ENST00000394986 FBXL22Q6P050 247 aa20.6■□□□□ 0.89
SNCA-203ENST00000394986 SYNPOQ8N3V7 929 aa20.6■□□□□ 0.89
SNCA-203ENST00000394986 CCDC185Q8N715 623 aa20.6■□□□□ 0.89
SNCA-203ENST00000394986 PRSS33Q8NF86 280 aa20.6■□□□□ 0.89
SNCA-203ENST00000394986 RPLP0P6Q8NHW5 317 aa20.6■□□□□ 0.89
SNCA-203ENST00000394986 IGSF8Q969P0 613 aa20.6■□□□□ 0.89
SNCA-203ENST00000394986 CNPY3Q9BT09 278 aa20.6■□□□□ 0.89
SNCA-203ENST00000394986 PAXBP1Q9Y5B6 917 aa20.6■□□□□ 0.89
SNCA-203ENST00000394986 KIAA1549LQ6ZVL6 1849 aa20.6■□□□□ 0.89
SNCA-203ENST00000394986 PRRT4C9JH25 899 aa20.59■□□□□ 0.89
SNCA-203ENST00000394986 CHRM1P11229 460 aaPredicted RBP20.59■□□□□ 0.89
SNCA-203ENST00000394986 PSMA2P25787 234 aa20.59■□□□□ 0.89
SNCA-203ENST00000394986 CDC25BP30305 580 aa20.59■□□□□ 0.89
SNCA-203ENST00000394986 HOXC13P31276 330 aa20.59■□□□□ 0.89
SNCA-203ENST00000394986 TIE1P35590 1138 aa20.59■□□□□ 0.89
SNCA-203ENST00000394986 FBXO43Q4G163 708 aa20.59■□□□□ 0.89
SNCA-203ENST00000394986 RNF43Q68DV7 783 aa20.59■□□□□ 0.89
SNCA-203ENST00000394986 CARNMT1Q8N4J0 409 aa20.59■□□□□ 0.89
SNCA-203ENST00000394986 RPRD1AQ96P16 312 aaPredicted RBP20.59■□□□□ 0.89
SNCA-203ENST00000394986 MAGEB5Q9BZ81 275 aa20.59■□□□□ 0.89
SNCA-203ENST00000394986 HCN2Q9UL51 889 aa20.59■□□□□ 0.89
SNCA-203ENST00000394986 A0A0A0MRY4 1105 aa20.58■□□□□ 0.88
SNCA-203ENST00000394986 TYW5A2RUC4 315 aaKnown RBP20.58■□□□□ 0.88
SNCA-203ENST00000394986 CYP1A2P05177 515 aa20.58■□□□□ 0.88
SNCA-203ENST00000394986 HLA-FP30511 346 aa20.58■□□□□ 0.88
SNCA-203ENST00000394986 SATB1Q01826 763 aa20.58■□□□□ 0.88
SNCA-203ENST00000394986 MPP7Q5T2T1 576 aa20.58■□□□□ 0.88
SNCA-203ENST00000394986 SCYL2Q6P3W7 929 aa20.58■□□□□ 0.88
SNCA-203ENST00000394986 C1orf210Q8IVY1 113 aa20.58■□□□□ 0.88
SNCA-203ENST00000394986 MFN1Q8IWA4 741 aa20.58■□□□□ 0.88
SNCA-203ENST00000394986 MAML2Q8IZL2 1156 aaPredicted RBP20.58■□□□□ 0.88
SNCA-203ENST00000394986 USP33Q8TEY7 942 aa20.58■□□□□ 0.88
SNCA-203ENST00000394986 BTBD6Q96KE9 485 aa20.58■□□□□ 0.88
SNCA-203ENST00000394986 NUP85Q9BW27 656 aa20.58■□□□□ 0.88
SNCA-203ENST00000394986 MRPL47Q9HD33 250 aaKnown RBP20.58■□□□□ 0.88
SNCA-203ENST00000394986 ABCB8Q9NUT2 735 aa20.58■□□□□ 0.88
SNCA-203ENST00000394986 SLC27A6Q9Y2P4 619 aa20.58■□□□□ 0.88
SNCA-203ENST00000394986 CD70P32970 193 aa20.57■□□□□ 0.88
SNCA-203ENST00000394986 ADRA1BP35368 520 aa20.57■□□□□ 0.88
SNCA-203ENST00000394986 TNFRSF4P43489 277 aa20.57■□□□□ 0.88
SNCA-203ENST00000394986 KIR2DL1P43626 348 aaPredicted RBP20.57■□□□□ 0.88
SNCA-203ENST00000394986 ANGPT1Q15389 498 aa20.57■□□□□ 0.88
SNCA-203ENST00000394986 PREPLQ4J6C6 727 aaPredicted RBP20.57■□□□□ 0.88
SNCA-203ENST00000394986 FSCBQ5H9T9 825 aa20.57■□□□□ 0.88
SNCA-203ENST00000394986 TSSK4Q6SA08 328 aa20.57■□□□□ 0.88
SNCA-203ENST00000394986 ANKS1BQ7Z6G8 1248 aa20.57■□□□□ 0.88
SNCA-203ENST00000394986 SPEM1Q8N4L4 309 aa20.57■□□□□ 0.88
SNCA-203ENST00000394986 ARFGAP1Q8N6T3 406 aa20.57■□□□□ 0.88
SNCA-203ENST00000394986 PANX2Q96RD6 677 aa20.57■□□□□ 0.88
SNCA-203ENST00000394986 SLC2A11Q9BYW1 496 aa20.57■□□□□ 0.88
SNCA-203ENST00000394986 IRX2Q9BZI1 471 aaPredicted RBP20.57■□□□□ 0.88
SNCA-203ENST00000394986 LAMTOR5O43504 91 aa20.56■□□□□ 0.88
SNCA-203ENST00000394986 LUC7L3O95232 432 aaKnown RBP20.56■□□□□ 0.88
SNCA-203ENST00000394986 COL9A1P20849 921 aa20.56■□□□□ 0.88
SNCA-203ENST00000394986 NUMBP49757 651 aa20.56■□□□□ 0.88
SNCA-203ENST00000394986 TCF15Q12870 199 aa20.56■□□□□ 0.88
SNCA-203ENST00000394986 MTA1Q13330 715 aa20.56■□□□□ 0.88
SNCA-203ENST00000394986 CDH18Q13634 790 aa20.56■□□□□ 0.88
SNCA-203ENST00000394986 RABGAP1LQ5R372 815 aa20.56■□□□□ 0.88
SNCA-203ENST00000394986 ARTNQ5T4W7 220 aa20.56■□□□□ 0.88
SNCA-203ENST00000394986 DAB2IPQ5VWQ8 1189 aa20.56■□□□□ 0.88
SNCA-203ENST00000394986 EGFLAMQ63HQ2 1017 aa20.56■□□□□ 0.88
SNCA-203ENST00000394986 TMEM215Q68D42 235 aa20.56■□□□□ 0.88
SNCA-203ENST00000394986 ZNF683Q8IZ20 524 aa20.56■□□□□ 0.88
SNCA-203ENST00000394986 CCDC33Q8N5R6 958 aa20.56■□□□□ 0.88
SNCA-203ENST00000394986 ALLCQ8N6M5 410 aa20.56■□□□□ 0.88
SNCA-203ENST00000394986 HAPLN3Q96S86 360 aa20.56■□□□□ 0.88
SNCA-203ENST00000394986 GGA2Q9UJY4 613 aa20.56■□□□□ 0.88
SNCA-203ENST00000394986 HCN4Q9Y3Q4 1203 aa20.56■□□□□ 0.88
SNCA-203ENST00000394986 H0Y858 1186 aa20.55■□□□□ 0.88
SNCA-203ENST00000394986 CNTN5O94779 1100 aa20.55■□□□□ 0.88
SNCA-203ENST00000394986 KLF8O95600 359 aaPredicted RBP20.55■□□□□ 0.88
SNCA-203ENST00000394986 H2AFZP0C0S5 128 aa20.55■□□□□ 0.88
SNCA-203ENST00000394986 LMAN2Q12907 356 aa20.55■□□□□ 0.88
SNCA-203ENST00000394986 ARL13BQ3SXY8 428 aa20.55■□□□□ 0.88
SNCA-203ENST00000394986 H2AFVQ71UI9 128 aa20.55■□□□□ 0.88
SNCA-203ENST00000394986 CCAR2Q8N163 923 aaKnown RBP20.55■□□□□ 0.88
SNCA-203ENST00000394986 IL17RCQ8NAC3 791 aa20.55■□□□□ 0.88
SNCA-203ENST00000394986 FIBINQ8TAL6 211 aa20.55■□□□□ 0.88
SNCA-203ENST00000394986 SORCS1Q8WY21 1168 aa20.55■□□□□ 0.88
SNCA-203ENST00000394986 CTNNBL1Q8WYA6 563 aaPredicted RBP20.55■□□□□ 0.88
SNCA-203ENST00000394986 ACOX2Q99424 681 aa20.55■□□□□ 0.88
SNCA-203ENST00000394986 IER2Q9BTL4 223 aa20.55■□□□□ 0.88
SNCA-203ENST00000394986 PRMT8Q9NR22 394 aaPredicted RBP20.55■□□□□ 0.88
SNCA-203ENST00000394986 TMEM51Q9NW97 253 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms