RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ABCB8Q9NUT2 735 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 ADAM22Q9P0K1 906 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 TMEM59LQ9UK28 342 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 SMG5Q9UPR3 1016 aaKnown RBP7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 DAAM1Q9Y4D1 1078 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 ZFHX2Q9C0A1 2572 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 A0A1W2PQF6 199 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 AXIN1O15169 862 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 PAGE1O75459 146 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 HLA-EP13747 358 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 NTSR1P30989 418 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 CCR1P32246 355 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 GBP1P32455 592 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 IL12RB1P42701 662 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 DGKEP52429 567 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 NRLP54845 237 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 SNX16P57768 344 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 DEUP1Q05D60 604 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 LMAN2Q12907 356 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 SIM2Q14190 667 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 FUT11Q495W5 492 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 EOGTQ5NDL2 527 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 SFMBT2Q5VUG0 894 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 SMYD5Q6GMV2 418 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 TRIM72Q6ZMU5 477 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 CHST9Q7L1S5 443 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 MON1BQ7L1V2 547 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 ZNF571Q7Z3V5 609 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 KBTBD6Q86V97 674 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 FAM131BQ86XD5 332 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 ZDHHC17Q8IUH5 632 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 MFN1Q8IWA4 741 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 FAM160A2Q8N612 972 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 HJURPQ8NCD3 748 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 MSANTD4Q8NCY6 345 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 HMGB4Q8WW32 186 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 RXFP2Q8WXD0 754 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 RLN3Q8WXF3 142 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 IGSF8Q969P0 613 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 AZIN2Q96A70 460 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 BTN2A3PQ96KV6 586 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 PRMT1Q99873 361 aaKnown RBP7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 HINFPQ9BQA5 517 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 FAM126AQ9BYI3 521 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 XPO4Q9C0E2 1151 aaKnown RBP7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 TKTL2Q9H0I9 626 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 SIK2Q9H0K1 926 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 EPC1Q9H2F5 836 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 CD93Q9NPY3 652 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 BCCIPQ9P287 314 aaKnown RBP eCLIP7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 GGA2Q9UJY4 613 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 VANGL2Q9ULK5 521 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 STAP1Q9ULZ2 295 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 SLC27A6Q9Y2P4 619 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 STARD13Q9Y3M8 1113 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 HS3ST4Q9Y661 456 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 STON1Q9Y6Q2 735 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 CACNA1IQ9P0X4 2223 aa7.94□□□□□ -1.14
HMGB3P1-201ENST00000393368 CACNA1HO95180 2353 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 MYOFQ9NZM1 2061 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 F5H5T6 163 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 RPP40O75818 363 aaKnown RBP7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 LUC7L3O95232 432 aaKnown RBP7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 CAVIN2O95810 425 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 PLEKP08567 350 aaPredicted RBP7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 PABPC1P11940 636 aaKnown RBP7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 GABRG2P18507 467 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 ABCB4P21439 1286 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 TNFAIP3P21580 790 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 BCKDHBP21953 392 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 RRM1P23921 792 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 PRKCHP24723 683 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 RFC1P35251 1148 aaPredicted RBP7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 SCNN1AP37088 669 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 CTSOP43234 321 aaPredicted RBP7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 CXCR3P49682 368 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 CDH18Q13634 790 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 AUHQ13825 339 aaKnown RBP7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 ZNF234Q14588 700 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 CCDC6Q16204 474 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 SLC25A52Q3SY17 297 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 CCDC14Q49A88 953 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 PREPLQ4J6C6 727 aaPredicted RBP7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 MBLAC2Q68D91 279 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 RNF43Q68DV7 783 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 FBXL22Q6P050 247 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 DNAJC24Q6P3W2 148 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 NUDT18Q6ZVK8 323 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 CEP68Q76N32 757 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 ADIPOR2Q86V24 386 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 RASSF3Q86WH2 238 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 PHF13Q86YI8 300 aaPredicted RBP7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 PGBD3Q8N328 593 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 CAMKK1Q8N5S9 505 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 ATP6V0D2Q8N8Y2 350 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 OR52K2Q8NGK3 314 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 CCDC26Q8TAB7 109 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 GAB3Q8WWW8 586 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 NT5C3BQ969T7 300 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms