RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 MAN2A1Q16706 1144 aa12.86□□□□□ -0.35
CTSC-202ENST00000393301 TCP11X2Q5H9J9 407 aa12.86□□□□□ -0.35
CTSC-202ENST00000393301 NUGGCQ68CJ6 796 aa12.86□□□□□ -0.35
CTSC-202ENST00000393301 PMF1Q6P1K2 205 aa12.86□□□□□ -0.35
CTSC-202ENST00000393301 KIAA1324Q6UXG2 1013 aaKnown RBP12.86□□□□□ -0.35
CTSC-202ENST00000393301 DBX2Q6ZNG2 339 aa12.86□□□□□ -0.35
CTSC-202ENST00000393301 RAB44Q7Z6P3 723 aaPredicted RBP12.86□□□□□ -0.35
CTSC-202ENST00000393301 ADIPOR2Q86V24 386 aa12.86□□□□□ -0.35
CTSC-202ENST00000393301 AHI1Q8N157 1196 aa12.86□□□□□ -0.35
CTSC-202ENST00000393301 SIX6OS1Q8N1H7 587 aa12.86□□□□□ -0.35
CTSC-202ENST00000393301 KDM1BQ8NB78 822 aa12.86□□□□□ -0.35
CTSC-202ENST00000393301 DDI1Q8WTU0 396 aa12.86□□□□□ -0.35
CTSC-202ENST00000393301 RNF139Q8WU17 664 aa12.86□□□□□ -0.35
CTSC-202ENST00000393301 PRCCQ92733 491 aaPredicted RBP12.86□□□□□ -0.35
CTSC-202ENST00000393301 NT5C1BQ96P26 610 aa12.86□□□□□ -0.35
CTSC-202ENST00000393301 NUP58Q9BVL2 599 aa12.86□□□□□ -0.35
CTSC-202ENST00000393301 PCDHGB2Q9Y5G2 931 aa12.86□□□□□ -0.35
CTSC-202ENST00000393301 TP53BP1Q12888 1972 aaPredicted RBP12.85□□□□□ -0.35
CTSC-202ENST00000393301 KNTC1P50748 2209 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 SYNCRIPO60506 623 aaKnown RBP12.85□□□□□ -0.35
CTSC-202ENST00000393301 CBFA2T3O75081 653 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 AFPP02771 609 aaKnown RBP12.85□□□□□ -0.35
CTSC-202ENST00000393301 CAPNS1P04632 268 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 CD19P15391 556 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 ZNF165P49910 485 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 STX17P56962 302 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 GRIK2Q13002 908 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 PTPRNQ16849 979 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 PLEKHG6Q3KR16 790 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 CCDC40Q4G0X9 1142 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 FAM133BQ5BKY9 247 aaKnown RBP12.85□□□□□ -0.35
CTSC-202ENST00000393301 PIK3R6Q5UE93 754 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 TMEM270Q6UE05 265 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 C11orf57Q6ZUT1 292 aaPredicted RBP12.85□□□□□ -0.35
CTSC-202ENST00000393301 ENOSF1Q7L5Y1 443 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 UNC45BQ8IWX7 931 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 BAHD1Q8TBE0 780 aaPredicted RBP12.85□□□□□ -0.35
CTSC-202ENST00000393301 NDRG1Q92597 394 aaKnown RBP12.85□□□□□ -0.35
CTSC-202ENST00000393301 SLC39A13Q96H72 371 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 HSD3B7Q9H2F3 369 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 FSCN3Q9NQT6 498 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 LIMA1Q9UHB6 759 aaKnown RBP12.85□□□□□ -0.35
CTSC-202ENST00000393301 SFMBT1Q9UHJ3 866 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 GGA2Q9UJY4 613 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 PLXNB3Q9ULL4 1909 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 PTPRBP23467 1997 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 NBEAQ8NFP9 2946 aa12.85□□□□□ -0.35
CTSC-202ENST00000393301 RNF225M0QZC1 329 aaPredicted RBP12.84□□□□□ -0.35
CTSC-202ENST00000393301 SART1O43290 800 aaKnown RBP12.84□□□□□ -0.35
CTSC-202ENST00000393301 DKK1O94907 266 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 TOP3BO95985 862 aaKnown RBP12.84□□□□□ -0.35
CTSC-202ENST00000393301 LTFP02788 710 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 EPHX1P07099 455 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 DLDP09622 509 aaKnown RBP12.84□□□□□ -0.35
CTSC-202ENST00000393301 PABPC1P11940 636 aaKnown RBP12.84□□□□□ -0.35
CTSC-202ENST00000393301 SIM1P81133 766 aaPredicted RBP12.84□□□□□ -0.35
CTSC-202ENST00000393301 EIF4EBP2Q13542 120 aaPredicted RBP12.84□□□□□ -0.35
CTSC-202ENST00000393301 IQCB1Q15051 598 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 TPD52L1Q16890 204 aaPredicted RBP12.84□□□□□ -0.35
CTSC-202ENST00000393301 MIIPQ5JXC2 388 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 DCAF12L1Q5VU92 463 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 IL27RAQ6UWB1 636 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 SERPINA13PQ6UXR4 307 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 DEFB119Q8N690 84 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 UBA3Q8TBC4 463 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 STK32AQ8WU08 396 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 ADAMTS14Q8WXS8 1223 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 TTC17Q96AE7 1141 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 TMA16Q96EY4 203 aaKnown RBP12.84□□□□□ -0.35
CTSC-202ENST00000393301 MYO19Q96H55 970 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 TUBGCP2Q9BSJ2 902 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 ANP32EQ9BTT0 268 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 GTPBP2Q9BX10 602 aaKnown RBP12.84□□□□□ -0.35
CTSC-202ENST00000393301 GPR174Q9BXC1 333 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 CIPCQ9C0C6 399 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 NDST4Q9H3R1 872 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 ZMIZ1Q9ULJ6 1067 aa12.84□□□□□ -0.35
CTSC-202ENST00000393301 TMEM131Q92545 1883 aa12.83□□□□□ -0.36
CTSC-202ENST00000393301 PAPSS1O43252 624 aaPredicted RBP12.83□□□□□ -0.36
CTSC-202ENST00000393301 MSI1O43347 362 aaKnown RBP12.83□□□□□ -0.36
CTSC-202ENST00000393301 ACSL4O60488 711 aa12.83□□□□□ -0.36
CTSC-202ENST00000393301 CER1O95813 267 aa12.83□□□□□ -0.36
CTSC-202ENST00000393301 IGLV3-25P01717 112 aa12.83□□□□□ -0.36
CTSC-202ENST00000393301 FYNP06241 537 aa12.83□□□□□ -0.36
CTSC-202ENST00000393301 GPD2P43304 727 aa12.83□□□□□ -0.36
CTSC-202ENST00000393301 SLC11A2P49281 568 aa12.83□□□□□ -0.36
CTSC-202ENST00000393301 FAM193AP78312 1265 aa12.83□□□□□ -0.36
CTSC-202ENST00000393301 BNC1Q01954 994 aa12.83□□□□□ -0.36
CTSC-202ENST00000393301 KCNJ12Q14500 433 aa12.83□□□□□ -0.36
CTSC-202ENST00000393301 ANO6Q4KMQ2 910 aa12.83□□□□□ -0.36
CTSC-202ENST00000393301 CHST9Q7L1S5 443 aa12.83□□□□□ -0.36
CTSC-202ENST00000393301 APTXQ7Z2E3 356 aaKnown RBP12.83□□□□□ -0.36
CTSC-202ENST00000393301 NAXDQ8IW45 347 aa12.83□□□□□ -0.36
CTSC-202ENST00000393301 DHX40Q8IX18 779 aaKnown RBP12.83□□□□□ -0.36
CTSC-202ENST00000393301 RGL4Q8IZJ4 473 aa12.83□□□□□ -0.36
CTSC-202ENST00000393301 EHBP1Q8NDI1 1231 aa12.83□□□□□ -0.36
CTSC-202ENST00000393301 FIBINQ8TAL6 211 aa12.83□□□□□ -0.36
CTSC-202ENST00000393301 WFDC5Q8TCV5 224 aa12.83□□□□□ -0.36
CTSC-202ENST00000393301 SORCS1Q8WY21 1168 aa12.83□□□□□ -0.36
CTSC-202ENST00000393301 EDEM1Q92611 657 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms